Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1236 ATGGAAGATGATGGGATGATATGCAACACAAGGTTGAGTCTAGGGCTTGGAATAGGAGGCTATGTGATGCCATTAAAGAAGCCGAAGATTGAAGAAGCCATTACTAATAAACAATTGATCAGTTTGAAGACCAGAAATATCGATGAAGAAGATGATGATGATCATAGGAATAGTTTCAGAAAGAAATTGAGGCTCACCAAAGAACAATCCGCCATGCTTGAAGATAGCTTTAAGCTCCATAGCTCTCTCAACCCACTCCAGAAACAAGAACTTGCTCAGCGATTGAATTTGAAGCCTAGACAGATCGAAGTTTGGTTTCAAAACAGAAGAGCAAGAAAAAAGTTGAAGCAAACAGAATTAGACTGCGAGTTGTTGAGAAAATGCTGTGAAAACCTAAGAAAGGAGAATAGAAGGTTGAAGAAGGAAGTGGAGGAACTACGCGATGGCCTGAAAGTTGAATCGCCGTCGCCATCATCGTCGTCGCGACCACCATTAATATTAGCAACTAGTAATAATAGTATTCAACTCTCTAGAGGAGCAGCCACACTTGCTCTATGTTCTTCTTGTGAGAAGCCATTAATCAAAGGCCATTAA 594 0.4057 MEDDGMICNTRLSLGLGIGGYVMPLKKPKIEEAITNKQLISLKTRNIDEEDDDDHRNSFRKKLRLTKEQSAMLEDSFKLHSSLNPLQKQELAQRLNLKPRQIEVWFQNRRARKKLKQTELDCELLRKCCENLRKENRRLKKEVEELRDGLKVESPSPSSSSRPPLILATSNNSIQLSRGAATLALCSSCEKPLIKGH 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1236 197 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 45 191 - -
Mibi13g1236 197 Pfam Homeodomain 60 114 IPR001356 GO:0003677
Mibi13g1236 197 SMART halz 116 160 IPR003106 GO:0006355|GO:0043565
Mibi13g1236 197 CDD homeodomain 60 117 IPR001356 GO:0003677
Mibi13g1236 197 Pfam Homeobox associated leucine zipper 116 149 IPR003106 GO:0006355|GO:0043565
Mibi13g1236 197 ProSitePatterns 'Homeobox' domain signature. 91 114 IPR017970 GO:0000981|GO:0006355
Mibi13g1236 197 SUPERFAMILY Homeodomain-like 53 117 IPR009057 -
Mibi13g1236 197 Coils Coil 115 149 - -
Mibi13g1236 197 Gene3D - 65 112 - -
Mibi13g1236 197 ProSiteProfiles 'Homeobox' domain profile. 56 116 IPR001356 GO:0003677
Mibi13g1236 197 SMART HOX_1 58 120 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1236 Mibi-ChrMibi13 17139722 17141182 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1236 47 191 Homeobox Transcription Factor Family AT4G37790 55.172 5.98e-48 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mibi13g1236 Homeodomain 7.3e-16 CL0123