Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1223 ATGGCTTCTTCTCCAAGTAAGCTTAGGTCCTACTATTGCGCTGCGTGTAATCATACTGTGTGGGTTTCTCCTAATAGCCATTGCAGTTATTGCAATAGCACTGATTTAGTGGCTCGTAAATGTACGCGTACACCTGAAGAAGTTTTCATTGAGCAGAGGCGGGCATTTGATGCTGACCAGAAGCCAGCTCCACGTTCTTCCATAGAGAACATGGAAAAGTTTACGATTACTGAGGAATCAGTGAAGACTCAGCCCGAATGCTCATTTTGTTTGACAGAATTTGAAATAGGAACGATCGCATCAATCATGAAATGTGGACATTTTTATCATGATCATTGTGTTATTCCCTGGTTGGAGCAGAAAAATGCTTGCCCTCTTTGTAAGGCCAACTTACCTCGGAGAGAGATTATTCCCTATCCCACATTCGACTCACAAGGTGGTGGCTCCTCCTCAAGTTCCTCACATGATATGGTGAGGTGGCAAGATAGGATGGGTTCGCGATTTGAACATAAGCTTGAGGGAGTGATTCCTACGGATAGAACAAGACCACTCAATTTTGGTGATGAAAGAAGGGTAAGAAGACTATGGCTTGTGGTTGTTGCTGCTATTGGACTCAGCAAATTGAATATCCAAGGTGTGTAG 642 0.4361 MASSPSKLRSYYCAACNHTVWVSPNSHCSYCNSTDLVARKCTRTPEEVFIEQRRAFDADQKPAPRSSIENMEKFTITEESVKTQPECSFCLTEFEIGTIASIMKCGHFYHDHCVIPWLEQKNACPLCKANLPRREIIPYPTFDSQGGGSSSSSSHDMVRWQDRMGSRFEHKLEGVIPTDRTRPLNFGDERRVRRLWLVVVAAIGLSKLNIQGV 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1223 213 ProSiteProfiles Zinc finger RING-type profile. 87 128 IPR001841 -
Mibi13g1223 213 SMART ring_2 87 127 IPR001841 -
Mibi13g1223 213 SUPERFAMILY RING/U-box 68 133 - -
Mibi13g1223 213 Pfam Ring finger domain 86 128 IPR001841 -
Mibi13g1223 213 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 36 172 - -
Mibi13g1223 213 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 49 134 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1223 Mibi-ChrMibi13 16810826 16813464 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1223 32 132 C3H Transcription Factor Family AT1G14200 32.727 1.31e-14 67.4