Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1220 ATGCTTGGCAACAATCTTCCCGAAGATCTCATGGAGGAGATCATGGTGAGGCTGCCAATAAAATCCTTGCTTCGATTCAAATGTGTAGCCAAATCATGGTATGCTCTAATAACTGAACATTCTTTTATCGCTAAACAATTTGAACGGTATGATTCTATCCATAAGAACCGTCGCCTTATGCTTGGCTACGAAATGTTCACTACCAAAGATCTACTACTACCCATGTCTTTGATTGATACTCGAGAACAACCCTACGAGACCCAACACATAGAATCGCCATTACCTGAGAAACATTTAAGTTACATGATTGTCTTTGGTCAATGTAATGGGATTTTCTGTCTTTGTGGATACTACTATCCTGGTGTTCAGCGCTTATTTTTGTGGAATCCGGCAACAAAAGAGGTGAAGGATATTCTTTCGTTTCAATTGAAACCCATGAATTGGGACGTGTATGGATTTGGGTTTGATTCCATAACAAAGGATTTCAAGGTTGTTACATTTCCATCGATGCACGACAACGAAAGACACCATCAACCTCAAATATACAATCTCAGCACTAATTCTTGGAGAGAACTAGATGTTGATTTCTCCTTTTTTAAATCATGTTTTTCATCACTCGTGGGTCCTTATTTGAATGGGGCTTATCACTGGTATATTACCCATAGCCATGATGATACTGATGATAAGTTTGTCGCGAGCTTTGATTTCAGCAAAGAGGCTTTTGGGATTATCCCATGTCCTGCAGGGATTACTATTACTTCCTCTAATTTTGAAGAAAATCTTCTTGCGGTAGTGGATGAGAACCTTGCTTGGGTAGTTAGACATGTCTCGATTGAGGTTTGTCTTGAGATTTGGGTGATGAACGAGTATGGTGTTAAGAGTAGTTGGACTAAGAAGTTTGAGATTCGTCCATTTCCTTACCCTTTCCCTTGGTATGCTCCCCAGATTTTTAGAGATAATGAGATTATTGTTTATCATAACATCAATCGTCAATACATTGCATATGATCTTCGGAATCAGACGAGAGAGATGTTGCAAGACTTCCGCTATCGAACGGATTATGTGGAAAGTTTATTTTCTTTAGGAGGTCAAGGAAAACACAAACAAATATGA 1113 0.389 MLGNNLPEDLMEEIMVRLPIKSLLRFKCVAKSWYALITEHSFIAKQFERYDSIHKNRRLMLGYEMFTTKDLLLPMSLIDTREQPYETQHIESPLPEKHLSYMIVFGQCNGIFCLCGYYYPGVQRLFLWNPATKEVKDILSFQLKPMNWDVYGFGFDSITKDFKVVTFPSMHDNERHHQPQIYNLSTNSWRELDVDFSFFKSCFSSLVGPYLNGAYHWYITHSHDDTDDKFVASFDFSKEAFGIIPCPAGITITSSNFEENLLAVVDENLAWVVRHVSIEVCLEIWVMNEYGVKSSWTKKFEIRPFPYPFPWYAPQIFRDNEIIVYHNINRQYIAYDLRNQTREMLQDFRYRTDYVESLFSLGGQGKHKQI 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1220 370 PANTHER OS09G0372900 PROTEIN-RELATED 6 321 - -
Mibi13g1220 370 SMART fbox_2 6 46 IPR001810 GO:0005515
Mibi13g1220 370 Gene3D - 4 42 - -
Mibi13g1220 370 TIGRFAM F_box_assoc_1: F-box protein interaction domain 106 331 IPR017451 -
Mibi13g1220 370 SUPERFAMILY Galactose oxidase, central domain 110 202 IPR011043 -
Mibi13g1220 370 ProSiteProfiles F-box domain profile. 1 50 IPR001810 GO:0005515
Mibi13g1220 370 SUPERFAMILY F-box domain 5 54 IPR036047 GO:0005515
Mibi13g1220 370 Pfam F-box associated 211 332 IPR006527 -
Mibi13g1220 370 Pfam F-box domain 5 42 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1220 Mibi-ChrMibi13 16742389 16743501 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1220 177 291 Carbohydrate Esterase AT1G25141 28.926 2.42e-07 49.3