Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1214 ATGAGTTACTTGAAGGGTTCACCTCGCCGTCAAAACGACGTAGAGGCGGGGAATAGTGGCTCCGGTAACTTTGAAGACGGAGAGGTTTCGTCCGATCCGTTTGATATTTCCAGTACAAAAAATGCTTCCATTGAAAGGCTCAGGCGGTGGAGGCAAGCTGCGCTTGTGCTTAATGCTTCTCGTCGATTTCGTTATACCTTGGACCTGAAAAAAGAAGAAGAGAAGCAGCAAACATTGAGGAAGATTAGGGCGCATGCACAAGCCATTAGGGCTGCATATCTTTTCAAAAAAGCTGCTGTGCCACCTGTGAATGGGGCTCCGGCACCACCTCCAGCTGCTTCTGGTGACTTTCCAATTGGACAAGAGCAGCTTGCTTCAATTTCAAGGGATCATAACGGTGATGTCCTACAGCAATATGGAGGGGTTAAAGGGCTCGCAGAGTCATTGAAAACCAATCTAGAGAAGGGGATTCATGGTGATGATGGTGACCTAATGAAGCGGAGAAATGCCTATGGGTCAAACAATTATCCTCGGAAGAAGCCCAGGAGTTTTTTGGTAAGTTTTGTGGCAATTTCATTTATGTTTGTGTGGGACGCGTGCAAGGATCTGACCCTGGTTATATTAATGGTCGCGGCAGTGGCTTCGTTGGCTTTAGGAATAAAGTCTGAGGGTATCAAGGAAGGATGGTATGATGGAGGGAGCATTGCATTCGCAGTTATTCTTGTTATTGTGGTTACAGCTATAAGTGATTATAAGCAATCTCTCCAGTTTCGCGATTTGAATGAGGAGAAGAGAAATATACATCTAGAGGTCATAAGAAATGGTAGAAGAGTTGAGATCTCAATCTATGATATTGTTGTTGGTGATGTTATACCTCTGAATATTGGTGACCAGGTCCCTGCTGATGGAATTTTGATCACTGGTTACTCTCTTGCAATTGATGAATCAAGTATGACTGGCGAGAGCAAGATTGTTCACAAGGACTCAAGGAACCCCTTTTTGATGTCTGGATGTAAAGTCGCAGATGGCAGTGGCACAATGCTGGTTACAGGTGTTGGTATTAATACTGAGTGGGGGCTTTTAATGGCTAGTATATCAGAAGACACTGGTGAAGAAACACCCTTGCAGGTACGCTTAAATGGTGTTGCCACCTTCATTGGTATCGTTGGACTAACTGTGGCTGCTGTTGTTCTGGTTGTGCTATTGGTCAGATATTTTACTGGGCATACTGAAAACTCAGATGGAAGCTCTCAGTTTAGGGCTGGACATACTAAACTTGGTACTGCTATTAATGGAGCAATTAAGATAGTCACAGTTGCTGTCACAATTGTAGTGGTTGCAGTACCTGAAGGGCTCCCTTTAGCAGTTACCTTAACACTTGCCTACTCAATGAGAAAAATGATGGCAGATAAAGCTTTGGTGAGGAGGCTTTCAGCCTGTGAGACAATGGGTTCTGCCACAACCATCTGCAGTGATAAGACTGGAACATTGACTAAGAATGAGATGACTGTGACTGAAGCTTACATTGGTGGGAAGAAGACTGATCCTCCTCACGACAAATTTGAGCTCTCTGATACGTATTGCTCTTTACTTGTTGAAGGTGTTGCACAAAACACCAATGGTAGTGTATATGTACCTGAGGGCGGTAACAATGTTGAGGTCTCTGGATCACCGACAGAGAAGGCAATTTTGAACTGGGGAATTCAGCTGGGGATGGATTTTGCGGCTGTCAGATCAGAGTCATCAATTATACATGTCTTTCCATTCAATTCGGAAAAAAAGCGTGGGGGAGTTGCAGTTAGGAAGCCTGACTCCCAAGTTCATATACACTGGAAAGGTGCTGCTGAGATAGTATTGGCCTGTTGTACAGCATATTTAGATGCAAATAACCAGTCAGTAGACATGGATGAAGAGAAGATGACATATTTCAAAAAAGCTATTGAAGACATGGCAGCTGGCAGCCTTCGCTGTGTTGCCATTGCATATAGATCTTGTGAAAATGAGAAAGTTCCAACAAGTGAAGAAGAACTTGCTCGCTGGTCATTACCGGAGGATGATCTTGTTTTGTTGGCTATTGTTGGTCTGAAGGATCCTTGTCGACCTGGTGTCAAGGATGCAGTGCAACTTTGCCAAAATGCTGGAGTGAAGGTGAGAATGGTCACCGGGGACAATGTGCAAACTGCGAAAGCAATTGCTCTGGAATGTGGAATACTTGGTTCATCTGCAGATGCCAGGGAGCCAAATATTATTGAAGGCAAAAGATTCCGGGAGTTATCAGACTCAGAGAGAGAGGAAATTGCAGAAAGGATTTCGGTTATGGGGCGGTCTTCTCCTAATGACAAGCTTTTGCTTGTGCAAGCCTTGAGAAAGAAGGGGCATGTCGTTGCTGTAACTGGGGATGGAACTAATGATGCTCCTGCTCTGCATGAGGCGGATATAGGTCTTGCAATGGGCATCCAAGGTACAGAAGTTGCTAAAGAGAGCTCTGATATCATCATTTTGGATGACAATTTTGCTTCAGTTGTGAAGGTTGTTAGATGGGGGCGGTCTGTATACGCAAATATCCAGAAATTTATTCAGTTTCAACTTACAGTAAATGTGGCAGCTCTTGTAATTAACGTTGTTGCTGCAGTTTCTTCCGGTGATGTCCCGCTGAATACTGTACAGCTTCTCTGGGTAAATCTGATTATGGATACACTTGGAGCACTAGCCTTGGCAACAGAACCACCAACTGATCACCTAATGGATCGATCTCCTGTGGGTCGAAGGGAGCCCCTCGTAACAAATATCATGTGGAGGAATTTGCTTATACAGGCAATATACCAAATATCTGTTTTGCTTGTACTCAATTTCCAAGGAAGGAGCATACTGGGTCTAAAGCATAAAGATTTCGCCCATTCTCTCAAAGTGAAGAACACTTTAATATTTAATGCATTTGTGTTCTGTCAAATCTTTAATGAATTCAATGCTCGAAAGCCAGATGAGTACAACATCTTCAAGGGGGTCACAAAAAATTACCTCTTTATGGGGATAGTGGGAATAACTCTTGTGCTTCAGATTATCATCATTGAATTTCTGGGAAAATTCACCAAGACAGTCAGGCTTAATTGGAAGATGTGGATAATATCTGTCGTCATCGGATTCATCGGCTGGCCTCTTGCTGCAGTTGGGAAGTTGATACCTTTGCCTGAAACACCCTTTGCCGAGTTTTTTAGGAGATGTTTCCGGCGGCGATGA 3237 0.4381 MSYLKGSPRRQNDVEAGNSGSGNFEDGEVSSDPFDISSTKNASIERLRRWRQAALVLNASRRFRYTLDLKKEEEKQQTLRKIRAHAQAIRAAYLFKKAAVPPVNGAPAPPPAASGDFPIGQEQLASISRDHNGDVLQQYGGVKGLAESLKTNLEKGIHGDDGDLMKRRNAYGSNNYPRKKPRSFLVSFVAISFMFVWDACKDLTLVILMVAAVASLALGIKSEGIKEGWYDGGSIAFAVILVIVVTAISDYKQSLQFRDLNEEKRNIHLEVIRNGRRVEISIYDIVVGDVIPLNIGDQVPADGILITGYSLAIDESSMTGESKIVHKDSRNPFLMSGCKVADGSGTMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLTVAAVVLVVLLVRYFTGHTENSDGSSQFRAGHTKLGTAINGAIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTKNEMTVTEAYIGGKKTDPPHDKFELSDTYCSLLVEGVAQNTNGSVYVPEGGNNVEVSGSPTEKAILNWGIQLGMDFAAVRSESSIIHVFPFNSEKKRGGVAVRKPDSQVHIHWKGAAEIVLACCTAYLDANNQSVDMDEEKMTYFKKAIEDMAAGSLRCVAIAYRSCENEKVPTSEEELARWSLPEDDLVLLAIVGLKDPCRPGVKDAVQLCQNAGVKVRMVTGDNVQTAKAIALECGILGSSADAREPNIIEGKRFRELSDSEREEIAERISVMGRSSPNDKLLLVQALRKKGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSSGDVPLNTVQLLWVNLIMDTLGALALATEPPTDHLMDRSPVGRREPLVTNIMWRNLLIQAIYQISVLLVLNFQGRSILGLKHKDFAHSLKVKNTLIFNAFVFCQIFNEFNARKPDEYNIFKGVTKNYLFMGIVGITLVLQIIIIEFLGKFTKTVRLNWKMWIISVVIGFIGWPLAAVGKLIPLPETPFAEFFRRCFRRR 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1214 1078 FunFam Calcium-transporting ATPase 500 698 - -
Mibi13g1214 1078 MobiDBLite consensus disorder prediction 12 36 - -
Mibi13g1214 1078 FunFam Calcium-transporting ATPase 42 98 - -
Mibi13g1214 1078 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 497 695 IPR023299 GO:0000166
Mibi13g1214 1078 PANTHER CATION TRANSPORTING ATPASE 83 1062 - -
Mibi13g1214 1078 Pfam Cation transporter/ATPase, N-terminus 140 215 IPR004014 -
Mibi13g1214 1078 FunFam Calcium-transporting ATPase 815 1064 - -
Mibi13g1214 1078 SUPERFAMILY Calcium ATPase, transduction domain A 268 363 IPR008250 -
Mibi13g1214 1078 SUPERFAMILY HAD-like 488 903 IPR036412 -
Mibi13g1214 1078 Pfam E1-E2 ATPase 268 468 - -
Mibi13g1214 1078 SFLD p-type atpase 472 850 IPR044492 -
Mibi13g1214 1078 CDD P-type_ATPase_Ca_PMCA-like 166 931 - -
Mibi13g1214 1078 ProSitePatterns E1-E2 ATPases phosphorylation site. 492 498 IPR018303 -
Mibi13g1214 1078 Pfam Ca2+-ATPase N terminal autoinhibitory domain 31 74 IPR024750 GO:0005516
Mibi13g1214 1078 SFLD C1.7: P-type atpase like 472 850 - -
Mibi13g1214 1078 FunFam Calcium-transporting ATPase 198 255 - -
Mibi13g1214 1078 PRINTS P-type cation-transporting ATPase superfamily signature 713 723 - -
Mibi13g1214 1078 PRINTS P-type cation-transporting ATPase superfamily signature 798 817 - -
Mibi13g1214 1078 PRINTS P-type cation-transporting ATPase superfamily signature 314 328 - -
Mibi13g1214 1078 PRINTS P-type cation-transporting ATPase superfamily signature 490 504 - -
Mibi13g1214 1078 PRINTS P-type cation-transporting ATPase superfamily signature 822 834 - -
Mibi13g1214 1078 PRINTS P-type cation-transporting ATPase superfamily signature 691 702 - -
Mibi13g1214 1078 SUPERFAMILY Calcium ATPase, transmembrane domain M 139 1061 IPR023298 -
Mibi13g1214 1078 Pfam Cation transporting ATPase, C-terminus 883 1060 IPR006068 -
Mibi13g1214 1078 Pfam haloacid dehalogenase-like hydrolase 487 812 - -
Mibi13g1214 1078 Gene3D - 165 366 - -
Mibi13g1214 1078 Gene3D - 42 97 - -
Mibi13g1214 1078 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 764 878 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g1214 1078 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 430 515 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g1214 1078 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 133 1061 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Mibi13g1214 1078 FunFam Calcium-transporting ATPase 9 plasma membrane-type 344 514 - -
Mibi13g1214 1078 PRINTS Sodium/potassium-transporting ATPase signature 233 253 - -
Mibi13g1214 1078 PRINTS Sodium/potassium-transporting ATPase signature 483 504 - -
Mibi13g1214 1078 PRINTS Sodium/potassium-transporting ATPase signature 870 891 - -
Mibi13g1214 1078 PRINTS Sodium/potassium-transporting ATPase signature 609 627 - -
Mibi13g1214 1078 Gene3D - 198 1050 - -
Mibi13g1214 1078 Gene3D - 500 698 IPR023299 GO:0000166
Mibi13g1214 1078 FunFam Calcium-transporting ATPase 692 843 - -
Mibi13g1214 1078 FunFam Calcium-transporting ATPase 245 366 - -
Mibi13g1214 1078 Gene3D - 487 843 IPR023214 -
Mibi13g1214 1078 MobiDBLite consensus disorder prediction 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1214 Mibi-ChrMibi13 16506367 16529558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1214 7 1078 Primary Pumps ATPases AT4G29900 73.674 0.0 1597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi13g1214 13 16506367 16529558 Mibi13g1214 13 16506367 16529558 ECH