Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1208 ATGGAGAATCTGGGCGACGAATTCAGGAATTACTGCTGGGAGACGCAAATGTGCACAACGCAAATGTTTGACGAATTCAATTGGGGACTGGAGGAGGCAATCTCCGGGTACTACGATTCGAGCTCGCCGGACGGCAACGCGTCGTCGTCGACGGCGTCGAAGAACATAGTCTCCGAGAGGAATCGCAGGAAGAAGCTCAACGAACGCCTCTTCGCTCTCAGAGCAGTTGTTCCCAATATTAGCAAGATGGATAAGGCGTCGATATTGAAGGATGCGATTGAGTATATTGAAAATTTGCACGAACAAGAGAAGAGCATAGAAGCAGAGATAATGGAGCTTGAATCTGGGAAGAACATGAACATGAACATGAATCAGAATTCATGCTTTGAATATGAACAAGACCTGCCTGTTCTTCTCAGGCCCAAAAGGAACAAGACTGAGCAGCAGCTTTATGAGTCCGTTAGCTCCAGAAACTCCCCCATTGAAGTTCATGAGCTAAGGGTGAGATCCATGGGAGAGAAGATAGTGGTGGTGAGCTTGACTTGCGGGAAGAGGACAGACACAATGGTGAAGCTGTGTGAAGCATTTGAATCATTGAAGCTTAAGATTATCACTGCCAACATGGTCTCCTTCTCTGGCACCCTCCTCAAGACTCTCTTCATTCAGGCAGATGAAGAAGAGAAAGATGTTGTACAGATAAAGATCCAAGCAGCTATTGCAGCTCTCAATGATCCTGAAAGCCCAATGAGCATATAA 756 0.4643 MENLGDEFRNYCWETQMCTTQMFDEFNWGLEEAISGYYDSSSPDGNASSSTASKNIVSERNRRKKLNERLFALRAVVPNISKMDKASILKDAIEYIENLHEQEKSIEAEIMELESGKNMNMNMNQNSCFEYEQDLPVLLRPKRNKTEQQLYESVSSRNSPIEVHELRVRSMGEKIVVVSLTCGKRTDTMVKLCEAFESLKLKIITANMVSFSGTLLKTLFIQADEEEKDVVQIKIQAAIAALNDPESPMSI 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1208 251 Pfam Helix-loop-helix DNA-binding domain 57 99 IPR011598 GO:0046983
Mibi13g1208 251 MobiDBLite consensus disorder prediction 40 59 - -
Mibi13g1208 251 SMART finulus 56 105 IPR011598 GO:0046983
Mibi13g1208 251 Coils Coil 89 116 - -
Mibi13g1208 251 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 50 99 IPR011598 GO:0046983
Mibi13g1208 251 FunFam Basic helix-loop-helix (BHLH) DNA-binding superfamily protein 46 117 - -
Mibi13g1208 251 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 42 237 - -
Mibi13g1208 251 MobiDBLite consensus disorder prediction 40 56 - -
Mibi13g1208 251 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 49 115 IPR036638 GO:0046983
Mibi13g1208 251 Gene3D - 44 116 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1208 Mibi-ChrMibi13 16157966 16164720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1208 1 222 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 56.951 1.09e-75 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi13g1208 HLH 7.4e-12 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi13g1208 13 16157966 16164720 Mibi13g1208 13 16157966 16164720 ECH