Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1202 ATGCGGGATAGTGAGAAGAATGTCAACATCAAAGGATCTAGAAAACAGAAGAATTCAAAAGTGCAAACTCAGTTAAAGCCATGCTCATCATTGAGATTCAAAGCCAATAGCCCAAAATCCCAAGTGAAGAAGCATAAATTAAAACCAAAGTCTCATGCACACAGAGTTGATGCAAATATATCAGGGAAGGCTGTCACTGTCTCTTCTAAGGAGGACCCAAGCAAGGACATTTCAGATAAAAACTTGATCATTAGAAAAGGTACACATAAAACCAATGGAAATCCATCACAGAACCCCAGCTCATTGAAGCCTCAGGGTGGTAAAGTTTCTCTTGGCCCTAAGAAAGAGGGTAAAGATATTGACGATGAGGTAAATATTCAGAAGCTTAGAAGGAGGAGAAAAAAGAAAAATCGAAGAAATCATGTGGATCTTGATGATGCTTCACGCCTGCAGAGGAGACTAAGGTATCTTCTGATTAAAATAAAGCGGGAGCAGAACCTTATTGATGCTTATTCTGGAGAAGGTTGGAAAGGTCAGAGTCAAGAGAAGATCAGGCCAGAAAAGGAGCTGCTGAGAGCTCAGAAGCAGATTTTACAATGTAAGCTGAGTATTCGTGATGCCATTCACCAGTTGGATACTCTTAGTTCGGTGGGTAGCATTGAGGGCTCTGTCATTGCTCCAGATGGATCAGTTTATCATGAACATATATTCTGTGCAAAGTGCAAATTGCGTGAAGCTTTCCCTGATAATGATATTATACTATGTGATGGCACCTGTAACCGTGCTTTTCACCAAAAATGCCTTGATCCTCCATTGGACACTGCAAATATTCCTCCTGGAGATCAGGGCTGGTTTTGCAAGTTTTGTGAATGTAAGATGGAAATACTGGAGGCAATAAATGCGCATCTTGGAACTCATTTTTCCCTTGACAGCTCTTGGCAGGATGTATTCAAGGAAGAAGCTTCCATACCTGATGGTGATACTGGTTTACTGAATCCAGAGGAAGAATGGCCATCAGATGAATCTGATGATGATGATTATAATCCTGAAAGGAGGGAGGATAGCCACAATATCAGTGCAGAGGATATTGATGGTGATGTAGCTGATGATTCAAGCAGTTCTACCAGTCTATGGAATTCAGATGATGGATATTCTCCAGGAATAGGAAAGGAAAGCATTGACCATGAATTTTTCTCTGTGAATAGTTGCATAGATTCTGACGAATCTGGAGAGATAGCATGTGGCCGGAGGCAGCGGAAAGCAGTTGACTACAAGAAACTCTATGATGAAATGTTTGGGAAAGATGCTCCTGCACTTGAACAAGTTAGTGAAGATGAAGACTGGGGTCCAGGCAGAAGAAAGCGAAGAGAGAAAGAATCTGATGCTGCTAATACTCTGATGACTCTCCATGAAAGTGAGAAAAAATGTTCCAATAACGAGCAGAATGTAATAAAGGAATTTTCTTCAGATCCCCAAAGTAAAAGACCTTGTTTCAGGCTTCCACGCCAAGCAGTTGAGAAGCTACGCCAGGCCTTTTCCGAGAATGAACTTCCTCCAAGATCAGTGAAAGATGGTCTTTCAAAAGAGTTGGGACTAGATGCTGATAAGGTTAGCAAATGGTTCAAAAATGCACGCTACTTAGCTCTTAGAGCCAGAAAGCAATCAGAAGGAACAGAACAGGCTGAACATCCTCAAAGCATCACTTCTAGAAACCCAGAAGGTCCTAGCTTACAAAATATGGAGATAGAGGATTTGACATCAAAGGAAACCTCAAAAGTAACTTTGACTGACCCTCAGACGAATGCTACAAATGACAGCCACAAAAAGCGCTTAAAGTCATCCCGTGGTAATCCTTTGAAGAAAAGGAAACAAGAGATATCTCCACCTCAATCGAAAGGAAATGGCAAGAAGGTACCTTTCTGTGAAATCAGTCCCCTTGTACAATTGATCAAGCAGGACTTGATTGAGTACAGTGATGATGTTAGCTTGAAGAAACTGTTGAAAGCAAAAAGGAAGAAAGTAACTTGTAAATTTGAGGGAGACTATGAAGCAGCAGATTTAGAATTTGAAAGACTTAGCAAACTGAAGAATAGAATAGACAGTATGAAGCAAAAAGTTCTTAGAATTAAAAGTCCCACAGCAAAGGATTCAGGAGGACCCAAATCCATAGAGCCAGTGGTTATATATGTACCCGTAGCTGAGTTAAAAGAAAAAAATTGA 2220 0.4068 MRDSEKNVNIKGSRKQKNSKVQTQLKPCSSLRFKANSPKSQVKKHKLKPKSHAHRVDANISGKAVTVSSKEDPSKDISDKNLIIRKGTHKTNGNPSQNPSSLKPQGGKVSLGPKKEGKDIDDEVNIQKLRRRRKKKNRRNHVDLDDASRLQRRLRYLLIKIKREQNLIDAYSGEGWKGQSQEKIRPEKELLRAQKQILQCKLSIRDAIHQLDTLSSVGSIEGSVIAPDGSVYHEHIFCAKCKLREAFPDNDIILCDGTCNRAFHQKCLDPPLDTANIPPGDQGWFCKFCECKMEILEAINAHLGTHFSLDSSWQDVFKEEASIPDGDTGLLNPEEEWPSDESDDDDYNPERREDSHNISAEDIDGDVADDSSSSTSLWNSDDGYSPGIGKESIDHEFFSVNSCIDSDESGEIACGRRQRKAVDYKKLYDEMFGKDAPALEQVSEDEDWGPGRRKRREKESDAANTLMTLHESEKKCSNNEQNVIKEFSSDPQSKRPCFRLPRQAVEKLRQAFSENELPPRSVKDGLSKELGLDADKVSKWFKNARYLALRARKQSEGTEQAEHPQSITSRNPEGPSLQNMEIEDLTSKETSKVTLTDPQTNATNDSHKKRLKSSRGNPLKKRKQEISPPQSKGNGKKVPFCEISPLVQLIKQDLIEYSDDVSLKKLLKAKRKKVTCKFEGDYEAADLEFERLSKLKNRIDSMKQKVLRIKSPTAKDSGGPKSIEPVVIYVPVAELKEKN 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1202 739 MobiDBLite consensus disorder prediction 334 348 - -
Mibi13g1202 739 MobiDBLite consensus disorder prediction 87 105 - -
Mibi13g1202 739 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 229 286 IPR013083 -
Mibi13g1202 739 MobiDBLite consensus disorder prediction 69 86 - -
Mibi13g1202 739 MobiDBLite consensus disorder prediction 1 124 - -
Mibi13g1202 739 MobiDBLite consensus disorder prediction 603 627 - -
Mibi13g1202 739 SUPERFAMILY FYVE/PHD zinc finger 229 295 IPR011011 -
Mibi13g1202 739 MobiDBLite consensus disorder prediction 438 461 - -
Mibi13g1202 739 ProSiteProfiles Zinc finger PHD-type profile. 235 292 IPR019787 -
Mibi13g1202 739 ProSiteProfiles 'Homeobox' domain profile. 491 551 IPR001356 GO:0003677
Mibi13g1202 739 Gene3D - 493 561 - -
Mibi13g1202 739 FunFam pathogenesis-related homeodomain protein-like 229 289 - -
Mibi13g1202 739 MobiDBLite consensus disorder prediction 38 52 - -
Mibi13g1202 739 MobiDBLite consensus disorder prediction 14 37 - -
Mibi13g1202 739 MobiDBLite consensus disorder prediction 551 638 - -
Mibi13g1202 739 SMART HOX_1 493 555 IPR001356 GO:0003677
Mibi13g1202 739 CDD homeodomain 494 555 IPR001356 GO:0003677
Mibi13g1202 739 Pfam Homeodomain 502 546 IPR001356 GO:0003677
Mibi13g1202 739 CDD PHD_PRHA_like 237 289 IPR045876 -
Mibi13g1202 739 FunFam pathogenesis-related homeodomain protein 493 557 - -
Mibi13g1202 739 ProSitePatterns Zinc finger PHD-type signature. 238 289 IPR019786 -
Mibi13g1202 739 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 27 738 - -
Mibi13g1202 739 Pfam PHD-finger 237 292 IPR019787 -
Mibi13g1202 739 SUPERFAMILY Homeodomain-like 493 557 IPR009057 -
Mibi13g1202 739 MobiDBLite consensus disorder prediction 323 385 - -
Mibi13g1202 739 MobiDBLite consensus disorder prediction 349 363 - -
Mibi13g1202 739 Coils Coil 685 705 - -
Mibi13g1202 739 SMART PHD_3 237 290 IPR001965 -
Mibi13g1202 739 MobiDBLite consensus disorder prediction 560 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1202 Mibi-ChrMibi13 16075655 16080747 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1202 140 564 Homeobox Transcription Factor Family AT4G29940 59.132 3.95e-160 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Mibi13g1202 PHD 2.5e-11 CL0390