Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1179 ATGGCGGAGGAGGGAAAGGAGAAGATAGTGATGAAGAAGAACAAATTGCAGAAAAGCTACTTTGATGTGCTTGGATTGTGTTGTTCTTCAGAGGTGCCTGTAATTGAGAATATACTTCAATCTCTTGATGGAATCAAGGAGGTTTCTGTCGTGGTGCCTTCCAGAACAGTCATCGTTGTTCATGATAGTCTTTTAATCTCACAATCTCAAATCGTGAAAGCTCTGAATCAGGGAAGATTTGAAGCAAACATAAGATCAGTAAATGGGAAAGAGAAGATGAAAAGGAGAATGCCAAGCCCATATGCAATAGCATGTGGAGTATTGCTTTTGCTTTCCTTTTTAAAGTATGTGTACCGTCCTTTGCAATATCTGGCTCTTGGAGCAGTCGCTGCTGGTGCTTTCCCTATCCTTTTGAAAGCCATTGCTTCCATTCGCAACCTAAGGATTGATATCAATATTCTCTTGCTCATTGCAGTTATTGGGACAATTGCTATGAATGATTATTTGGAAGCTGGCACCATTGTTTTTTTATCTTCAATTGCAGAATGGTTAGAGTCAAGGGCAAGCCTCAAGGCAAGCGAGGCAATGTCGTCGTTGACGGACATAGCCCCACAAAAAGCAGTGATAGCAGACACCGGAGAAGCGGTCGACGCCGATGAGGTGAAAGTGAACACAATCATAGCCGTTAAAGCAGGGGAAGTGATAGCCATTGATGGAATTGTTGTAGAAGGAAGTTGTGAAGTTGATGAGAAGTCATTGACTGGGGAGTCATACCCTGTACATAAACAAAAGGACTCTCCTGTGTGGGCTGGCACTATCAACTTAAATGGTTACATTGCTGTAAAGACTACTGCACTTTCGGAGGACTGTGTGGTGGCCAAAATGGCCAAGCTAGTGGAAGAAGCTCAAAACAGCAAAACCAGCACTCAGAGATTGATTGATAAATTTGCCAAATTTTACACCCCAGCTGTTGTGGTGATATCAACTCTTATAGCAGTGATTCCACTTGCGTTAAGAGTGAATAATAAGAGACATTGGTTTCACTTTGCGTTGGTAGTTTTAGTAAGTGCATGTCCATGTGCACTTATACTTTCAACGCCAGTTGCAACATTCTGTGCTTATACAAAAGCAGCTAAATCTGGTCTTCTCATCAAAGGTGGTCATTATCTCGAAACCCTTGCCAAAATTAAGGTGATGGCTTTTGACAAAACGGGTACCATCACAAAAGGGGAATTTTGTGTGTCAAATTTCCAGTCTCTTTGTGATGACATTGATTTCAACACATTACTACAATGGGTCACAAGCATTGAAAGCAAGTCAAGCCATCCAATTGCAGCAGCAATAGTGGACTATGGAAGGTCACTCTCCATTGAACCAAAGCCTGAAATGGTGACAGAATTTGAAAACTTTCCTGGAGAGGGCATTCATGGAAAAATTGATGGGAGAGATATTTACATTGGAAATAGAAAAATTGTCACTAGAGCTGGGTCTGAATCAGTTCCGGCCCCACAAGGTGACAATCTGGTTGGAAAAACAAGTGGATACATCTACAGTGGAGGAATGCAAATTGGATTTTTCTCTCTGACAGATGCTTGCCGATCTGGTGCCCAGGACGCAATAAAGAAGCTCAAGTCATTGAGCATCAAGACCTCCATGCTCACAGGGGATAGTCAAGCAGCTGCCATGCAAGCACATGACCAGCTAGGACATGTTCTGGAGCTAGTTCATGCAGAACTTTTACCTGAAGACAAAGCAAGAATCATTAAAGAATTCAAGAAGAAGGAAGGACCAACGGCCATGGTTGGAGATGGCATAAATGATGCACCAGCACTAGCTGTAGCTGATATTGGCATCTCAATGGGGATTTCAGGCTCTGCACTAGCAAGTGAAACAGGCAACATAATTCTTATGTCAAATGATCTAAGGAAGATACCTCAAGCCATCAAGCTTGCCAGAAAATCTCGCCGGAAAGTCATTGAAAATATCATCTTGTCGGTCATCACTAAATCCGCGATCCTTGGCTTGGCCATTTGGGGCCATCCACTTGTTTGGGCAGCAGTTCTTGCTGATGTAGGAACATGCCTTTTGGTGATCTTAAACAGCATGCTACTTTTAAATGGATCACCCAAGCATAAAGGACAATGTTGTGCACATTCCTCTGAACTACACAACCATAAAGATGGATGTAAGGAACCTAATAACAACTTTTCTCATCAACATCATCATCATGATCATGGACATGAGCATCAGCATCAGAGCAACGATCACCATTGTTGCTTGGACAAGAAGAAAGTGATGTCCCGGCCTCATAAATGCGAGGCCTCCCTAATAACGGTCTCAAAATGCAAGTCTAGCCCTGCAATTCCAGGCTTGTGTGGACGTGATGCTATGAATGGTAGTATCATGAAGAGTAGCCATGGTCAATGTAAAGTCAACGGTGAGTCCCATGAACACAAGCATTGTCATCAAGGAAGTTGTGACAAGAATCAAGATGGAATACATTCACACGATGCAAAAAACCCAACTTGTTTGGGTTCTCACAATTTGGAACTGCTCGCAGAAGAGAAGCGCACGAGTGCATTGAACAACATTGGTAATTGTTTGGAACAGAGCAAGTCCAATGAAACAGTACATTGCCATGATGGGAAATGTGACATGAGGACTCATGGCATTCCATCACACATTTCTCCTTGCCATCTCAAGTCTTGTGCTTCAAAAGATTGCCAAAAATTTGAAAGTAAAAAAAATTGCCACTTGATCTCTAGTGAAAATACAAAATGCCATTCTAGTGGGCATTATCAAAACCTAGAGTCTCCTTCTAAGCCTGGCAACAAGCCCGAGGGAGATCACATATGTGTAGACATTGACGATAAGCATGTCAAATCAGACTCAATGCAAACTTATGTGTGCTCAGAAGAGAAAGAATCCACTTTTGTATGCAGTACTTGTGAGAGTTCAAGTGGTAAACAAGTTGAATCCACAGATTTCTCTGTTGTGCATGCTTGTGTGAGTTTAGACAAGAGAGAGATTGGTTCATGTTGCAAGAGCCACAAGAAGGAATGTTGTGGCAAGCATGAAAATTTACATGCTACTGGATTTGTAGTAAGCTTATCAGATATTATCATTGAATAG 3132 0.4205 MAEEGKEKIVMKKNKLQKSYFDVLGLCCSSEVPVIENILQSLDGIKEVSVVVPSRTVIVVHDSLLISQSQIVKALNQGRFEANIRSVNGKEKMKRRMPSPYAIACGVLLLLSFLKYVYRPLQYLALGAVAAGAFPILLKAIASIRNLRIDINILLLIAVIGTIAMNDYLEAGTIVFLSSIAEWLESRASLKASEAMSSLTDIAPQKAVIADTGEAVDADEVKVNTIIAVKAGEVIAIDGIVVEGSCEVDEKSLTGESYPVHKQKDSPVWAGTINLNGYIAVKTTALSEDCVVAKMAKLVEEAQNSKTSTQRLIDKFAKFYTPAVVVISTLIAVIPLALRVNNKRHWFHFALVVLVSACPCALILSTPVATFCAYTKAAKSGLLIKGGHYLETLAKIKVMAFDKTGTITKGEFCVSNFQSLCDDIDFNTLLQWVTSIESKSSHPIAAAIVDYGRSLSIEPKPEMVTEFENFPGEGIHGKIDGRDIYIGNRKIVTRAGSESVPAPQGDNLVGKTSGYIYSGGMQIGFFSLTDACRSGAQDAIKKLKSLSIKTSMLTGDSQAAAMQAHDQLGHVLELVHAELLPEDKARIIKEFKKKEGPTAMVGDGINDAPALAVADIGISMGISGSALASETGNIILMSNDLRKIPQAIKLARKSRRKVIENIILSVITKSAILGLAIWGHPLVWAAVLADVGTCLLVILNSMLLLNGSPKHKGQCCAHSSELHNHKDGCKEPNNNFSHQHHHHDHGHEHQHQSNDHHCCLDKKKVMSRPHKCEASLITVSKCKSSPAIPGLCGRDAMNGSIMKSSHGQCKVNGESHEHKHCHQGSCDKNQDGIHSHDAKNPTCLGSHNLELLAEEKRTSALNNIGNCLEQSKSNETVHCHDGKCDMRTHGIPSHISPCHLKSCASKDCQKFESKKNCHLISSENTKCHSSGHYQNLESPSKPGNKPEGDHICVDIDDKHVKSDSMQTYVCSEEKESTFVCSTCESSSGKQVESTDFSVVHACVSLDKREIGSCCKSHKKECCGKHENLHATGFVVSLSDIIIE 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1179 1043 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 12 706 - -
Mibi13g1179 1043 SUPERFAMILY Calcium ATPase, transmembrane domain M 151 491 IPR023298 -
Mibi13g1179 1043 SUPERFAMILY HMA, heavy metal-associated domain 12 88 IPR036163 GO:0046872
Mibi13g1179 1043 ProSiteProfiles Heavy-metal-associated domain profile. 18 84 IPR006121 GO:0046872
Mibi13g1179 1043 FunFam Putative cadmium/zinc-transporting ATPase 3 411 532 - -
Mibi13g1179 1043 SUPERFAMILY HAD-like 399 702 IPR036412 -
Mibi13g1179 1043 CDD P-type_ATPase_HM 102 703 - -
Mibi13g1179 1043 PRINTS P-type cation-transporting ATPase superfamily signature 601 620 - -
Mibi13g1179 1043 PRINTS P-type cation-transporting ATPase superfamily signature 625 637 - -
Mibi13g1179 1043 PRINTS P-type cation-transporting ATPase superfamily signature 400 414 - -
Mibi13g1179 1043 PRINTS P-type cation-transporting ATPase superfamily signature 546 556 - -
Mibi13g1179 1043 PRINTS P-type cation-transporting ATPase superfamily signature 249 263 - -
Mibi13g1179 1043 Gene3D - 391 652 IPR023214 -
Mibi13g1179 1043 MobiDBLite consensus disorder prediction 727 741 - -
Mibi13g1179 1043 FunFam Putative cadmium/zinc-transporting ATPase 3 13 86 - -
Mibi13g1179 1043 ProSitePatterns E1-E2 ATPases phosphorylation site. 402 408 IPR018303 -
Mibi13g1179 1043 SFLD Haloacid Dehalogenase 383 653 - -
Mibi13g1179 1043 SUPERFAMILY Calcium ATPase, transduction domain A 214 299 IPR008250 -
Mibi13g1179 1043 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 151 492 - -
Mibi13g1179 1043 Pfam E1-E2 ATPase 210 379 - -
Mibi13g1179 1043 FunFam Probable cation-transporting P-type ATPase 527 652 - -
Mibi13g1179 1043 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 523 679 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g1179 1043 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 174 420 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g1179 1043 SFLD p-type atpase 383 653 IPR044492 -
Mibi13g1179 1043 Gene3D - 188 303 - -
Mibi13g1179 1043 FunFam Copper-transporting ATPase 1, putative 189 303 - -
Mibi13g1179 1043 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 151 704 IPR027256 GO:0006812|GO:0016020|GO:0019829
Mibi13g1179 1043 MobiDBLite consensus disorder prediction 727 754 - -
Mibi13g1179 1043 PRINTS Copper-transporting ATPase signature 322 336 - -
Mibi13g1179 1043 PRINTS Copper-transporting ATPase signature 636 650 - -
Mibi13g1179 1043 PRINTS Copper-transporting ATPase signature 578 595 - -
Mibi13g1179 1043 PRINTS Copper-transporting ATPase signature 191 209 - -
Mibi13g1179 1043 Gene3D - 12 86 - -
Mibi13g1179 1043 CDD HMA 21 82 IPR006121 GO:0046872
Mibi13g1179 1043 Gene3D - 411 532 IPR023299 GO:0000166
Mibi13g1179 1043 MobiDBLite consensus disorder prediction 928 948 - -
Mibi13g1179 1043 Pfam haloacid dehalogenase-like hydrolase 396 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1179 Mibi-ChrMibi13 15663870 15676805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1179 11 720 Primary Pumps ATPases AT4G30110 67.606 0.0 1007