Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1163 ATGGTAATAAAGATAAAATTTGTTCTTAGAGATGACAAGTGGTGTAAGAAAGAGGCCGCAATTATAGTGCCAGGGGATATTATAAGCATAAAGCAAGGTGATATCATAACAGCGGATGCTCATCTTCTTGATGGAGATCCTTTGAAGGTAGATCAATCTGTTCTTACTGGGGAATCCCTCCCTGTGACCAAGAATGCTGGGGATGAAGTTTTCTCAGGATCAACCTGTAAACAAGGGCAAGTAAAGATTATGGACTTGTGTAACCTCAGGGAAGATGCAAAAAAGAGGGTCCAAGATATTATTGACAAATTTGCAGAAAGTGGGTTTAGTTCACTTGCTGTTGCCAGACAGGGAGTCCCTGAGAGAACTAAAGAAAGTCCTGGTGAATCATGGCAGTTTGTTGGCTTGCTGCCATTGTTTGATCCCCCAAGGCATGATAGTGCTGATACCATCCAAAGAGCTCTTAATCTTGGTGTACAAGTCAAAATGATTACTGGTGATCAACTTGCCATAGCAAAGGAGAGTGGTAGGAGGCTTGGGATGGGAACAAATATGTATCCATCTGCTTCCTTGTTTGGCAATAATATGGCTGCACTTCCTTTAGGAGAGCAGATTGAGAAGGCAGATGGATTTTCCGGAGTATGTCCTGGTGTGTGA 657 0.4262 MVIKIKFVLRDDKWCKKEAAIIVPGDIISIKQGDIITADAHLLDGDPLKVDQSVLTGESLPVTKNAGDEVFSGSTCKQGQVKIMDLCNLREDAKKRVQDIIDKFAESGFSSLAVARQGVPERTKESPGESWQFVGLLPLFDPPRHDSADTIQRALNLGVQVKMITGDQLAIAKESGRRLGMGTNMYPSASLFGNNMAALPLGEQIEKADGFSGVCPGV 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1163 218 PANTHER CALCIUM-TRANSPORTING ATPASE 83 216 - -
Mibi13g1163 218 SUPERFAMILY Calcium ATPase, transduction domain A 7 83 IPR008250 -
Mibi13g1163 218 Pfam E1-E2 ATPase 8 83 - -
Mibi13g1163 218 SUPERFAMILY HAD-like 93 183 IPR036412 -
Mibi13g1163 218 FunFam Plasma membrane ATPase 4 86 - -
Mibi13g1163 218 Gene3D - 8 82 - -
Mibi13g1163 218 PRINTS H+-transporting ATPase (proton pump) signature 97 115 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g1163 218 PRINTS H+-transporting ATPase (proton pump) signature 208 218 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g1163 218 Gene3D - 83 140 IPR023299 GO:0000166
Mibi13g1163 218 Gene3D - 141 216 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1163 Mibi-ChrMibi13 15362197 15364060 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1163 8 82 Primary Pumps ATPases AT1G80660 74.667 1.11e-31 119