Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1157 ATGGCTGATGTTGCTGTAGGAATTACTGTTGTCGTCTTATTAGTTTTGATTACTGTGGTTTATATGAGATCAACTAGAAACTGTCACCCTCATAGCTCCCAGCTTATTTCAGACGCAGAATTTCTGACATACACAATGGATAAGTTTCTACATGAAATGGAGAAGGAAAAGCCAATCAGGTTTGCCTCACATCATTTGATGCTTGCAACTAACAACTACTCCAACATGTTGGGTTCAGGTGGTTTTGGATCAGTCTATAAAGGCATTTTTAGTGATGGAACCATTGTGGCTGTTAAGGTTTTGAATAAGAACTCTAACAAGAGAATAGAGGAGCAATTCATGGCAGAAGTAGGCACAATTGGAAGGGTTCATCATTTCAATCTACTTCGCCTATTTGGATTTTGCATTGATGGGAATATAAGGGCTTTAGTTTATGAATACATGGGCAATGGCTCCCTTGACAAGCATCTGTTTAATCAAGACAAGGCATTAGGATTTAAAAAGCTTCATGAGATTGCAGTTGGAACGGCCAAAGGGATTTCATATTTGCATGAAGAGTGCCAACAAAGAATTGTTCATTATGACATAAAGCCAGAAAACATCCTCTTGGACGATAACTTGTGTCCTAAGGTTGCTGACTTTGGTTTGGCAAAGCTCTCCAATAGAGAAAATACTCATATTACCATGACTGGGGGTAGAGGGACCCCCGGTTATGCTGCGCCTGAGCTCTGGATGCCGTTTCCAATAACCTACAAGTGTGATGTTTATAGCTTTGGAATGTTGTTATTTGAAATCATAGGCAGGAGAAGGAATCTTGATATTAACCTTACAGAAGAAAGTAAAGAGTGGTTTCCAAGATGGGTTTGGGTAAAATTTGACAGTGGAGAACTAAATGAAATGATAAGAGAGTGTGGAATAGAGGAGGAAGATGAGGAGATGGCAAAAAGAATGGTGAAGATAGCTCTTTGGTGTGTTCAGTATAAACCTGAATTGAGGCCTATGATGAGTGTTGTGGTGAAAATGTTGGAGGGGTCAGAGGAAATCCCAGAACCTTCTAATCCTTTTCAGCACTTCATGGACGCAAATTATCCTATACAAATATCAGTTCACACAACACAAACTGATACTAGTGTTTGTTCTGGATCTTCTGTAATAGCATCATCTAATCCTAGCAATAATTTGAATGCTACTCCAATTATGAGTAAGTATGAGATTCAATTAGCCTCTAGTCAGGATTGA 1239 0.3906 MADVAVGITVVVLLVLITVVYMRSTRNCHPHSSQLISDAEFLTYTMDKFLHEMEKEKPIRFASHHLMLATNNYSNMLGSGGFGSVYKGIFSDGTIVAVKVLNKNSNKRIEEQFMAEVGTIGRVHHFNLLRLFGFCIDGNIRALVYEYMGNGSLDKHLFNQDKALGFKKLHEIAVGTAKGISYLHEECQQRIVHYDIKPENILLDDNLCPKVADFGLAKLSNRENTHITMTGGRGTPGYAAPELWMPFPITYKCDVYSFGMLLFEIIGRRRNLDINLTEESKEWFPRWVWVKFDSGELNEMIRECGIEEEDEEMAKRMVKIALWCVQYKPELRPMMSVVVKMLEGSEEIPEPSNPFQHFMDANYPIQISVHTTQTDTSVCSGSSVIASSNPSNNLNATPIMSKYEIQLASSQD 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1157 412 SMART serkin_6 71 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g1157 412 ProSiteProfiles Protein kinase domain profile. 71 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g1157 412 FunFam serine/threonine-protein kinase PBS1-like 43 147 - -
Mibi13g1157 412 Gene3D Phosphorylase Kinase; domain 1 45 147 - -
Mibi13g1157 412 PANTHER OS07G0415500 PROTEIN 4 356 - -
Mibi13g1157 412 ProSitePatterns Protein kinases ATP-binding region signature. 77 99 IPR017441 GO:0005524
Mibi13g1157 412 SUPERFAMILY Protein kinase-like (PK-like) 63 380 IPR011009 -
Mibi13g1157 412 FunFam Putative receptor-like protein kinase 148 350 - -
Mibi13g1157 412 Pfam Protein tyrosine and serine/threonine kinase 74 342 IPR001245 GO:0004672|GO:0006468
Mibi13g1157 412 Gene3D Transferase(Phosphotransferase) domain 1 148 356 - -
Mibi13g1157 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1157 Mibi-ChrMibi13 15229509 15230870 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1157 60 355 Receptor kinase-like Gene Family AT5G38280 42.244 7.55e-80 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Mibi13g1157 PK_Tyr_Ser-Thr 2e-47 CL0016