Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1156 ATGTCTCCAGATGAATCTAATAGACTGATTATTAGCTTGACAACAAGTGTGGGTCCGTTCATAGTAATGATTGTCATATATGTCTTCTATTGTAAAATATGTATGTACCAAAGGCGCAAACCAGCAAAAGTGGCAGAACTAGAAAGTGGGAACTCAGATTTCCTTACATATAGAATGGACAAGTTTCTAAATGATATTGAATCAGAAAAGCCAATCAGATTCACATCACATCAACTAATGCGTGCAACAAACAACTACTCCAGCATGTTGGGGTCGGGAGGTTTTGGATCAGTTTATAAAGGAGGTTTTGGCGATGGATCAATTGTGGCAGTGAAAGTTCTACATGGTGGCATTTCTGATGAGAGAATGGAAGAGCAATTCATGGCTGAAGTGGGCACAATTGGAAGAGTTCATCATTTCAATATGGTTCGTCTCATTGGATTTTGCATTGAAAAGAACACAACGGCTCTAGTTTATGAGTACATGAGTAATGGCTCTCTAGACAAATATTTGTTCGGTAAAAACAATAAGAGCTTAGATTTTGAGAAGTTGCATGAGATTGCAGTTGGAACGGCCAAAGGAATTGCTTACTTGCATGAAGATTGTCAAGAGAGGATCATCCACTATGATATAAAACCTGAAAACATCCTTTTGGATGATAACTTGAATCCTAAAGTTTCTGATTTTGGTTTAGCCAAGCTTTGTAACAGAGAAAAGTCTTATGTTACAATGACTGGTTTACGAGGGACACCAGGTTATGCTGCACCAGAACTATGGATGCCTTTTCATGTAACTCACAAATGTGATATTTTCAGCTTTGGAATGTTGTTATTTGAAATCATAGGAAGAAGAAGGAACCTTGATGTGAACCTAACAGAAAGTTTAGAGTGGTTTCCAAGATCGGTTTGGATAAGGTTTGAAACTGAAAAACTACAAGAGTTGATAAATGATTGTGGTATTGAAGATAATGATAAGGATATGGTGGAAAGAATGGTAAGGATAGCTTTTTGGTGTGTTCAGTATAGACCAGAATTGAGACCCATGATGAGTGTTGTGGTGAAAATGTTGGAAGGCTCTATGGATATCCCAAATCCTAAAAACCCATTTCAACACTTGATGGAAGAAGACGATCATCATCCAACAATCAGTAAAGCAGAACAAAAGGATGTTAGTATCGATCTTGCTTCATCTCTTGATCAGGTAACTGAATCTACCATGATCTCATCTTTTGAGATCGATGTAGATTCAAGCCCACATTAA 1260 0.3746 MSPDESNRLIISLTTSVGPFIVMIVIYVFYCKICMYQRRKPAKVAELESGNSDFLTYRMDKFLNDIESEKPIRFTSHQLMRATNNYSSMLGSGGFGSVYKGGFGDGSIVAVKVLHGGISDERMEEQFMAEVGTIGRVHHFNMVRLIGFCIEKNTTALVYEYMSNGSLDKYLFGKNNKSLDFEKLHEIAVGTAKGIAYLHEDCQERIIHYDIKPENILLDDNLNPKVSDFGLAKLCNREKSYVTMTGLRGTPGYAAPELWMPFHVTHKCDIFSFGMLLFEIIGRRRNLDVNLTESLEWFPRSVWIRFETEKLQELINDCGIEDNDKDMVERMVRIAFWCVQYRPELRPMMSVVVKMLEGSMDIPNPKNPFQHLMEEDDHHPTISKAEQKDVSIDLASSLDQVTESTMISSFEIDVDSSPH 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1156 419 ProSitePatterns Protein kinases ATP-binding region signature. 90 112 IPR017441 GO:0005524
Mibi13g1156 419 PANTHER OS07G0415500 PROTEIN 8 369 - -
Mibi13g1156 419 Gene3D Phosphorylase Kinase; domain 1 58 161 - -
Mibi13g1156 419 ProSiteProfiles Protein kinase domain profile. 84 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g1156 419 FunFam serine/threonine-protein kinase PBS1-like 56 161 - -
Mibi13g1156 419 SUPERFAMILY Protein kinase-like (PK-like) 66 357 IPR011009 -
Mibi13g1156 419 Pfam Protein tyrosine and serine/threonine kinase 87 356 IPR001245 GO:0004672|GO:0006468
Mibi13g1156 419 Gene3D Transferase(Phosphotransferase) domain 1 162 378 - -
Mibi13g1156 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Mibi13g1156 419 FunFam Putative receptor-like protein kinase 162 364 - -
Mibi13g1156 419 SMART serkin_6 84 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1156 Mibi-ChrMibi13 15221789 15223351 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1156 73 375 Receptor kinase-like Gene Family AT5G38280 41.935 6.56e-80 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Mibi13g1156 PK_Tyr_Ser-Thr 4.2e-47 CL0016