Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1154 ATGAGTGCTCGACAAGGTTTTAGATTTTATGGGAAAGGGTTCTGCACACAAAGGGAGGTTTTTACTGTTTTAACGACAAAGATGAGCTTTGTGTTTTCTCCACCTTCGTTTCATAGTTCTTCATACGATGATTTTCAGACACAAGCACAAGATACGTTCGATAAATTCGGTGACAGTGTTAGTTCTACCATGAAATGGGCAGTGGCCGGGTCCATTGTTTATGGGGTGGTGGTGATAATAGCCATTATAGCAATAGTATACGCCATTGTTGAGTGCTTGAAGAAAGCAGGATCAGTGATTCCAGCTGCTTACACACAGATTCCAACCACAGAAAAGGACCATAACGCTTCAGATTCACATAATCCTTCAAACAACAAAGAAATTGCATTAGCAATGCCAACGGATTCACAAGTGCTAGAATTTGCAACTATGGAAAGATTCCTCAACAACATCAACCAAGAGAAACCCATCAGATTCTCACCTGAGGAGCTTGAACAAATCACAAAAGACTACACAACTATTTTGGGGTCTGGTGCTTTTGGGGTGGTTTATGAAGGTGAGTTATCAAATGGACAGCAGGTTGCAGTAAAAGTTCTCAACAGCATGGATCTTGGTACAGAAGAACAATTCAAGGCAGAAGTTAGCACTATAGGAAGAACTTACCATATCAATTTAGTTATGCTTTATGGCTTCTGCTTCCACCGTGACAAGCGAGCTCTTGTGTATGAGTTTGTGCAAAATGGATCTCTAAACAATTTACTATTTGGAAGCCTGAACAGAGAAGTTGAGTTTGGGAAGCTTCATGAGATTGCAATTGGAACTGCAAAAGGAATTGCTTACTTACATGAAGAGTGTCAACATAGGATCATTCACTATGATATAAAACCGGAGAACATACTTCTTGGCTTGAGCTTGGAACCAAAAGTGGCGGATTTTGGTCTTGCCAAACTTTGCAGCAGAGAAAGCAGCCATGTGAATATGACACATTTTAGAGGAACAAGAGGGTATGCAGCACCAGAATTGTGGAATATTTGTCCTGTAAATCATAAGTGTGATGTTTATAGTTTTGGTATTGTTCTGTTTGAAATTGTGGGGAGAAGAAGGCATTTTGATAGTTGTTATAGTGAATCACAACAATGGCTTCCAAAATGGACATGGGATATGTTTGAGAACAATGAAATACCAGTGATGATTTCACTTTGTGGGATCGAAGAGAAAGATAGGGAAAAAGCTCAGAGAATGTTAATGGTGGCTTTTTGGTGTGTTCAATATTCCCCTTCTGATAGGCCTCTTATGAGTAATGTGGTGAAGATGTTAGAGGGTGATATGGAAATCCGTACGCCACCATTTCCATTTCAGAATTTGGTGTCTTTTAAACCAAATTCGACTTCACATGGAACCAATGAAGATTCGGATGCTTCTACTTCATGGGTGACAGAATCTTCTGAACAATCTAATTCTAAACCAGAGCCAAAGAATATATTCCATATAGAAAAATCTGCATAG 1506 0.3938 MSARQGFRFYGKGFCTQREVFTVLTTKMSFVFSPPSFHSSSYDDFQTQAQDTFDKFGDSVSSTMKWAVAGSIVYGVVVIIAIIAIVYAIVECLKKAGSVIPAAYTQIPTTEKDHNASDSHNPSNNKEIALAMPTDSQVLEFATMERFLNNINQEKPIRFSPEELEQITKDYTTILGSGAFGVVYEGELSNGQQVAVKVLNSMDLGTEEQFKAEVSTIGRTYHINLVMLYGFCFHRDKRALVYEFVQNGSLNNLLFGSLNREVEFGKLHEIAIGTAKGIAYLHEECQHRIIHYDIKPENILLGLSLEPKVADFGLAKLCSRESSHVNMTHFRGTRGYAAPELWNICPVNHKCDVYSFGIVLFEIVGRRRHFDSCYSESQQWLPKWTWDMFENNEIPVMISLCGIEEKDREKAQRMLMVAFWCVQYSPSDRPLMSNVVKMLEGDMEIRTPPFPFQNLVSFKPNSTSHGTNEDSDASTSWVTESSEQSNSKPEPKNIFHIEKSA 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1154 501 MobiDBLite consensus disorder prediction 461 501 - -
Mibi13g1154 501 MobiDBLite consensus disorder prediction 461 491 - -
Mibi13g1154 501 FunFam S-receptor-like serine/threonine-protein kinase 140 244 - -
Mibi13g1154 501 ProSitePatterns Protein kinases ATP-binding region signature. 175 197 IPR017441 GO:0005524
Mibi13g1154 501 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 245 449 - -
Mibi13g1154 501 Pfam Protein kinase domain 173 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g1154 501 Gene3D Transferase(Phosphotransferase) domain 1 245 447 - -
Mibi13g1154 501 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 60 450 - -
Mibi13g1154 501 ProSitePatterns Serine/Threonine protein kinases active-site signature. 289 301 IPR008271 GO:0004672|GO:0006468
Mibi13g1154 501 ProSiteProfiles Protein kinase domain profile. 169 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g1154 501 Gene3D Phosphorylase Kinase; domain 1 135 244 - -
Mibi13g1154 501 SMART serkin_6 169 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g1154 501 SUPERFAMILY Protein kinase-like (PK-like) 151 440 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1154 Mibi-ChrMibi13 15174372 15177561 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1154 158 481 Receptor kinase-like Gene Family AT5G38280 40.785 3.82e-85 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Mibi13g1154 Pkinase 2.2e-44 CL0016