Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1152 ATGGTGATGTTTGGTTTGAAAAATGGATGGAAAGAATTTGCAGAGTATCATTCTCTCTTAAAGGGAAGATTATTAGTCTTTGGGTATGACGATTCCAATTCTCATCATTTAGGCGTTCTAATAATGGACCTCACAACTTCAGAAGAAATAGAATATCCTTCAACTCTTGGCGGTCAAGGTAGCCAAGGAAACGGGTTTAATTCTAAGGCCCTTAAAGTCAAAGGTGAAGCTGTTAATAACGAGAATATGGCAAGAGCACTTGAAATAGCTAAAGCTTTCAAATCTCAATCTCAGCATCCTTCTTTCATATTTGTTGCCAGACCATCCTACATTCATACTTCTAGTCAAGTTGCTATACCATCTGAATTTGCCATGAAGTTCTTGGCTTCAAAAAAGAGTGGACAAAATACCAATCTTCGGACTTCAAATGGGAAGGTTTGGGTTACTAAGTTCACCACAAGGAAACAGAACACAACAACAAAATTCGAACTCTCTAATGTCGGGTGGAGGTCATTTGTGAAGGACAATGGCTTGAATGTAGATGATGTTTGTGTTTTTGAGCTCATCGAAGGAGCAACTCATGACACCAATTTTCGGGTTTCAATCTTTCGAAACTCTAATCCTTCAGACGATCCTTTGTCTCAAGCAACAGGAAAACATACCCAGAAAAACAAGAGGGTGAAAATTAAAAGAGAGACACAGGAGTTTCAAGTTTCTCCAAAGAAACCTAAATTTACAAAAGCTACTTCTTCTAGAGAAGCTGCTGCTCATAGTTTCAACTCAGAAAACCCCTTCTTCAAAGTAACCATAGGATTATCCCGTTGTCAGGCAATACCATCGACTTTTGTGAGGAAATACGCCTATCATGTGAAGTTCATTCAAATGACAGTGAAGATAGAAGTCACCTTTATTGAAGCTAAGGAAGAGATGGGATTGGATGGTCGGACGAGTTCGTACATCCACCGGAAACTGCTCTAA 978 0.3916 MVMFGLKNGWKEFAEYHSLLKGRLLVFGYDDSNSHHLGVLIMDLTTSEEIEYPSTLGGQGSQGNGFNSKALKVKGEAVNNENMARALEIAKAFKSQSQHPSFIFVARPSYIHTSSQVAIPSEFAMKFLASKKSGQNTNLRTSNGKVWVTKFTTRKQNTTTKFELSNVGWRSFVKDNGLNVDDVCVFELIEGATHDTNFRVSIFRNSNPSDDPLSQATGKHTQKNKRVKIKRETQEFQVSPKKPKFTKATSSREAAAHSFNSENPFFKVTIGLSRCQAIPSTFVRKYAYHVKFIQMTVKIEVTFIEAKEEMGLDGRTSSYIHRKLL 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1152 325 Pfam B3 DNA binding domain 105 205 IPR003340 GO:0003677
Mibi13g1152 325 PANTHER B3 DOMAIN-CONTAINING 6 189 - -
Mibi13g1152 325 CDD B3_DNA 100 204 IPR003340 GO:0003677
Mibi13g1152 325 SUPERFAMILY DNA-binding pseudobarrel domain 96 207 IPR015300 -
Mibi13g1152 325 Gene3D - 77 207 IPR015300 -
Mibi13g1152 325 SUPERFAMILY DNA-binding pseudobarrel domain 4 43 IPR015300 -
Mibi13g1152 325 ProSiteProfiles B3 DNA-binding domain profile. 102 206 IPR003340 GO:0003677
Mibi13g1152 325 SMART B3_2 104 206 IPR003340 GO:0003677
Mibi13g1152 325 ProSiteProfiles B3 DNA-binding domain profile. 1 43 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1152 Mibi-ChrMibi13 15160704 15164166 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1152 54 204 REM Transcription Factor Family AT1G49480 31.579 7.30e-11 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mibi13g1152 B3 1.2e-16 CL0405