Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1147 ATGAAGTATATGCGGACCAACAGCCTCAAGAGGCTCTTCTCATTGAAACGACGACGCAGTTTCAACGATAAACTTCCCATCAGCGACGAAAAAGTTGAAAACTTTGACGTCCTTCTTCCACTTTCATTAGAACAACCTCCTCAAAGACCCACTTGGAAATGCTTCTCCTACGAAGAACTGTACGATGCCACCAATGGCTTCAGCCCAGAGAATTTGGTTGGCAAAGGAGGTTACGCGCAGGTTTACAAGGGGACATTGAAGACAAATGGGTATGAGATTGCGGTAAAGAGGCTCACAAGAACTTCTAGCGATGAGAGGAAGGAGAAGGAATTTTTGATGGAGATTGGTACAATTGGTCATGTTAATCATCCAAATGTATTGCCTCTTCTGGGTTGTTGTATTGACAAGGGGCTTTACCTTGTATTCGAGCTTTCATCCAAAGGTTCTGTTGCGTCACTACTTCATGATCAAAACCTGCCTCCCATGGACTGGAAAACCAGGCATAAGATTGTTCTTGGGACTGCTCGTGGCCTCCATTACTTGCACAAAGGCTGCAAAAGAAGGATAATCCATAGGGACATCAAGGCCTCTAACATTTTATTAACTGAAGATTTTGAACCACAGATATCTGATTTCGGGCTGGCAAAATGGCTTCCTAATCAGTGGACTCATCATTCAATAGCTCCAATAGAAGGGACATTTGGACATTTGGCACCAGAGTACTATTTACATGGAATAGTGGATGAGAAAACAGACGTGTTTGCTTATGGGGTTTTCATGCTGGAAGTCATCTCAGGGAGGAAACCGGTGGACAGCTCTCACCAAAGCTTACACAACTGGGCGAAACCATTACTGAACACAGAGGAAATAGAAAAGCTGGTAGATCCAAAGCTAGAAGGGGCCTACGATTTAGCTCAGTTACAAAGACTTTCCTTTGCAGCTTCCCTCTGTATTCGAGCTTCTGCAACTTGGCGACCTACCATGAGCCAGGTATTGGAGGTAATGGAGGAGGCAGAAATGGACAAGGAGAAGTGGAAGATGCCAGAGGAAGAAGAAGAACAAGAGGAAGAATTCTGGGGATTTGAGGATTTGGAATGTGATTATGAGAGTTCATTCTCTCTGTCTCTACCAGACTCCATTGGAAGCTCTTAA 1152 0.4427 MKYMRTNSLKRLFSLKRRRSFNDKLPISDEKVENFDVLLPLSLEQPPQRPTWKCFSYEELYDATNGFSPENLVGKGGYAQVYKGTLKTNGYEIAVKRLTRTSSDERKEKEFLMEIGTIGHVNHPNVLPLLGCCIDKGLYLVFELSSKGSVASLLHDQNLPPMDWKTRHKIVLGTARGLHYLHKGCKRRIIHRDIKASNILLTEDFEPQISDFGLAKWLPNQWTHHSIAPIEGTFGHLAPEYYLHGIVDEKTDVFAYGVFMLEVISGRKPVDSSHQSLHNWAKPLLNTEEIEKLVDPKLEGAYDLAQLQRLSFAASLCIRASATWRPTMSQVLEVMEEAEMDKEKWKMPEEEEEQEEEFWGFEDLECDYESSFSLSLPDSIGSS 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1147 383 SUPERFAMILY Protein kinase-like (PK-like) 52 351 IPR011009 -
Mibi13g1147 383 FunFam Putative receptor-like serine/threonine-protein kinase 146 360 - -
Mibi13g1147 383 PANTHER OS08G0249100 PROTEIN 42 365 - -
Mibi13g1147 383 ProSiteProfiles Protein kinase domain profile. 67 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g1147 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Mibi13g1147 383 Gene3D Phosphorylase Kinase; domain 1 42 144 - -
Mibi13g1147 383 Gene3D Transferase(Phosphotransferase) domain 1 146 362 - -
Mibi13g1147 383 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
Mibi13g1147 383 FunFam Putative receptor-like serine/threonine-protein kinase 39 144 - -
Mibi13g1147 383 Pfam Protein kinase domain 70 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g1147 383 SMART serkin_6 67 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1147 Mibi-ChrMibi13 15111460 15115953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1147 55 331 Trihelix Transcription Factor Family AT1G68690 46.690 4.44e-72 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mibi13g1147 Pkinase 1.1e-42 CL0016