Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1126 ATGGGTCGAGCTCCATGCTGTGACAAAGCGAATGTGAAGAAAGGACCATGGTCTCCAGAAGAGGATGCTATACTCAAAGCATATATTGATAAGCATGGAACTGGAAGCAACTGGATTGCTCTTCCTCAAAAAATTGGGCTGAAAAGGTGTGGGAAAAGTTGCAGACTAAGATGGTTAAATTACCTGAGGCCAAATATCAAGCATGGTGGTTTCACTGAAGAAGAAGACAACATCATTAGCAGCCTCTACATTAGCATTGGCAGCAGGTGGTCCATTATAGCGGCTCAGCTTCCTGGAAGAACAGACAATGACATCAAGAATTATTGGAATACAAGGTTGAAGAAGAAACTTCTTGGTAGGCGCAAGAAAGATAGCACAAATTTAGATCAGGACAACCCTAATAATTCCGATCATACCCTCAGCAACTCAGCCCTAGAAAGGCTTCAACTTCACATGCAACTTCAAAACCCTAATAATAATAATAATACTTTCTCTTTCCACAACAACAATCCTTCCCTCTGGCCTAAGTTACATCCTCTCCAACAAAAACTCATCCACAACACCCTACAATCCCTCAACCATAACTCTCATTTCACTACTACCACCATACCACAAAAACATGATCCAGAAAGTGTGAAGATCATCCGTCCAGAGAGCTCGGGGGCTGTGACAGGTAATCCGGTGAACATGGGCCGGGTTGATCAATTTGATGTGGGGATGGATCAAGTTTGTGCTTTGCAAACTGAGCTTGAAGGCATTCTCATGAATAATGATTATGTGACAACAACATCGAAGCAGAAGCAGAAGGAGGGGGAGGAGCAAGTTGGTGAATATGGTTATTTCGGAGAGATTATGAGAGGTTCATCGTTGAAGGACGATTTGAGGTGGTGGTCCAATGATTTTGATGCCAAATCAGCATCCTCAAACTCTTTAGATTCAACCACCACCACTAATCAGATTCTTCATCTAGATGATCAGGGCATGTTTCAAGATTATGAACTAGGTTACATTTTGTAG 1017 0.4228 MGRAPCCDKANVKKGPWSPEEDAILKAYIDKHGTGSNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFTEEEDNIISSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGRRKKDSTNLDQDNPNNSDHTLSNSALERLQLHMQLQNPNNNNNTFSFHNNNPSLWPKLHPLQQKLIHNTLQSLNHNSHFTTTTIPQKHDPESVKIIRPESSGAVTGNPVNMGRVDQFDVGMDQVCALQTELEGILMNNDYVTTTSKQKQKEGEEQVGEYGYFGEIMRGSSLKDDLRWWSNDFDAKSASSNSLDSTTTTNQILHLDDQGMFQDYELGYIL 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1126 338 FunFam Transcription factor RAX3 7 68 - -
Mibi13g1126 338 CDD SANT 71 111 IPR001005 -
Mibi13g1126 338 CDD SANT 16 62 IPR001005 -
Mibi13g1126 338 Gene3D - 70 143 - -
Mibi13g1126 338 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mibi13g1126 338 SMART sant 13 64 IPR001005 -
Mibi13g1126 338 SMART sant 67 115 IPR001005 -
Mibi13g1126 338 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Mibi13g1126 338 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Mibi13g1126 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Mibi13g1126 338 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Mibi13g1126 338 MobiDBLite consensus disorder prediction 119 140 - -
Mibi13g1126 338 PANTHER OS09G0431300 PROTEIN 1 255 - -
Mibi13g1126 338 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Mibi13g1126 338 Gene3D - 7 68 - -
Mibi13g1126 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1126 Mibi-ChrMibi13 14858791 14860841 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1126 1 216 MYB Transcription Factor Family AT5G57620 68.584 1.67e-97 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi13g1126 Myb_DNA-binding 2.2e-13 CL0123