Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1125 ATGGATAGTCCTACTGCAATTCAACCTTCTACACCCGGTTCGGGTTCTGGTTCTGCATCTGGTTTAATGCCTGGTTGCAATGACGATATCCAGCGGGTCAAATTCTTGTGTAGCTTTCTAGGAAATATAATGCCCCGTCCCCTAGATGGGAAGCTTCGCTATGTCGGTGGAGAGACGCGAATTGTGAGTGTTCCACGAGATATTGTTTATGAGGAGTTGATGAGTAAGATGAGGGAACTGTATGATGGGGCAGCAGTCCTAAAGTACCAGCAACCTGATGAGGATCTTGATGCCCTTGTCTCTGTTGTGAATGATGATGATGTGGTAAATATGATGGAAGAGTATGACAAATTGGGTTCAAGTGATGGTTTCACTAGGCTCAGAATTTTTTTGTTCTCACAATCTGAACAGGATGTTTCTCCACATTTCATTGATGGGGATGACAGGGATACTGAGAGAAGATATGTTGATGCTTTGAATAATTTAAACGATCCTTTGGATTTTAGGAAGCAGCAGTTAGGTGAGTTTCCTATGATTGGTTCGGTTGAGGATATACATGGTGCTGATCAGTTCTTTAATCAAATCAATGTGGATGGTGGCCTTCATAGCCAGAGAAGTGGTGAGGTGCCTATGGCACATTTTAACTTGCACCATCCCTCGCTAACTCCCATTGCATCAGGGCAACACCAACAACCTGTATCCCAGAGGTATAGTGACGTTGATGCACCATGGAGTCCTGCATATTACTCTCCTAGGCATCATGGTCACCATGACTCTAGATCGGTGGTAGAATTTCCATCTTCTCCTTCTTCTGCAAGGTATCAGATGCCATTTTCAGAGCTGCCAGATAAATGCCTTGATAGAATGCCAGAAGAATATACTCGGCATCAGGTAAATCACCACCCTGTGTGTGACAATCAACCACAATATTCCGATAATGTCGTGTGGTATCCAACCGGAGCTTCTTCTAGTGAGAAGTTAGGGGGTTTTCCGGGCAATATTATTCATGGCCCTCATGTTATTGATGGGAACAGTATTTGTGAGCACTGCCGGATGAATTTTCAGAGAAGTCAATCTCATTTTGAGCTCCCAAATGTTAGTAATGGACTTCCACCAGTTGCTAATCCATGTGCAGAATGCCTCTCAAACAGGGATACTCTTATAACAAATGCAGATGCGAAGATGCATTCTGTTATGTATCCTAATGAGCCAAATAATGATCATAGGTCTGCTTATAATGATACTCAAAATCATGAGAGGGGATGGGCTTTGCCGCATCAAACAAATCATCGGGTTGAGGAAGCCAGGAGTCAAGTTCCTGGATCAGGAAGATTGAATGATCATTATGTTATTGATGGTCCTGGCATAAATTTCTCTCTTGGGCATGTCAGTGGGGTTGATGGACATCATTTGCCTTCAAACTGCATTCACCAAAGAGCTGGACCTGAATTGGGGCCTGGACTGTGTCATGATCAAGCAGGGGCTACTACAGCCCATCCACAAATTCTGCCTTTGGAAGAGCGCAATGTGCGGTATGGGAATCTGCCTTCTTATGGAGTAGATAGTCATTACTCTGTGACACATGGACATGTACCTGGGCTTTCTTTCTGGAGAAACACTCCACCTCCAGTTCGCATTGGACCATCTTACGAGGCATCCAATCCACCTCAGCAGTTGAATGGTGTGGTAAATTCAGGAATAAGGGGAGAGGGTAGTCCAAGAATCTACCTTGGACCAGGTAGTCAAAGTCCTTGGGGTGATTCCTCACACAAAATGCCAGGTCATGATGGATTACCCATCCCAGAATACCCATATGCTCATGCTGTTAAGTTCAATCCAAGGACCCTTGGTCAAGAAAATCAACACCCAGTTGCTGTGGATACCATTCATTCCCCACAGGACATGAATGTTGGCATTCGATTGGAACCAGGGCAGCTGCCAAAATCGCCTTTTGATATGGCTCACAACAATGAGGTTTTGAACAATGGTACTCGTATATCTGAAGCGATGGGGTCCCTGAGTTTGCATGGTGAATATAAAGGGGAAGAAAATGCAGGCAAGGTTGAGAACTCTAATGCTGTGAGTATATCTTTTTCAGGGCAAAACAAAATCGCTGAGAATCATAATGAAGCTGCTGCTTCTGTTGAGTCTAAAAATGAAAAATCAAAACCTGTTGAAGAATGTCATGATGTTGCGAAACTAGTAGATGGGGATCTAACTGTTCCTGAAGATTCCAAGCATCTAGCTACTCAATTCCGTTTCTTGCCTGAGTTGATTGCTTCTGTAAAAAAGGCTGCCTTGGAGGGCGCTGAGGAGGTGAAAGCTAGAGCTAACGAGCAAACCACTTCTCAGAGTCACAATTCAGCAGTCAAAGATGACACAGCAAATGAAGGAGAGTCAGGGAATGCTCATGGTGATTTAGAATTGGATTCTGATAACGACAACGTGGATACTTCTATAATTGAACCTACAAAAGCTGAGGCAGAAGCTATTGCTAGAGGACTGCAGACAATTAAAAATGATGATTTGGAAGAGATCCGTGAACTAGGTTCAGGAACTTATGGGGCTGTCTATCACGGGAAATGGAAAGGTTCTGATGTGGCGATTAAGAGGATAAAAGCTAGCTGTTTTGCTGGAAGGCCATCAGAAAGAGAAAGATTGATTGCAGATTTCTGGAAAGAGGCATTGATACTAAGTTCACTTCATCACCCAAATGTTGTGTCCTTCTATGGTATTGTCCGTGATGGCCCTGATGGTTCTTTGGCAACTGTAACCGAGTTCATGATTAATGGATCCTTGAAACAGTTCTTGCATAAGAAAGATAGAACTATAGATCGCCGTAAGAGGCTCATTATAGCTATGGATGCGGCATTTGGGATGGAGTATTTGCATGGAAAGAACATTGTGCATTTTGACTTGAAATGTGAGAATCTATTAGTCAATATGAGAGATCCGCAACGACCAGTCTGCAAGATAGGTGATTTGGGTTTATCGAAGGTAAAACAGAACACTCTAGTATCTGGAGGGGTGCGGGGAACCTTGCCATGGATGGCACCTGAACTCTTAAGTGGGAAAAGCAATATGGTGTCAGAGAAGATTGATGTTTATTCATTTGGGATTGTTATGTGGGAATTGCTCACTGGGGATGAACCCTATGCTGATATGCATTGTGCTTCAATAATAGGGGGTATTGTGAACAACACATTACGTCCTCAGATTCCAACATGGTGTGATCCTGAGTGGAAGTCTTTAATGGAAAGTTGCTGGGCTTCTGATCCGACAGAGAGGCCATCTTTCTCTGAAATCTCAAAGAAGCTAAGAAGTATGGCTGCGCAAATGAATGTTAAGTAG 3351 0.4348 MDSPTAIQPSTPGSGSGSASGLMPGCNDDIQRVKFLCSFLGNIMPRPLDGKLRYVGGETRIVSVPRDIVYEELMSKMRELYDGAAVLKYQQPDEDLDALVSVVNDDDVVNMMEEYDKLGSSDGFTRLRIFLFSQSEQDVSPHFIDGDDRDTERRYVDALNNLNDPLDFRKQQLGEFPMIGSVEDIHGADQFFNQINVDGGLHSQRSGEVPMAHFNLHHPSLTPIASGQHQQPVSQRYSDVDAPWSPAYYSPRHHGHHDSRSVVEFPSSPSSARYQMPFSELPDKCLDRMPEEYTRHQVNHHPVCDNQPQYSDNVVWYPTGASSSEKLGGFPGNIIHGPHVIDGNSICEHCRMNFQRSQSHFELPNVSNGLPPVANPCAECLSNRDTLITNADAKMHSVMYPNEPNNDHRSAYNDTQNHERGWALPHQTNHRVEEARSQVPGSGRLNDHYVIDGPGINFSLGHVSGVDGHHLPSNCIHQRAGPELGPGLCHDQAGATTAHPQILPLEERNVRYGNLPSYGVDSHYSVTHGHVPGLSFWRNTPPPVRIGPSYEASNPPQQLNGVVNSGIRGEGSPRIYLGPGSQSPWGDSSHKMPGHDGLPIPEYPYAHAVKFNPRTLGQENQHPVAVDTIHSPQDMNVGIRLEPGQLPKSPFDMAHNNEVLNNGTRISEAMGSLSLHGEYKGEENAGKVENSNAVSISFSGQNKIAENHNEAAASVESKNEKSKPVEECHDVAKLVDGDLTVPEDSKHLATQFRFLPELIASVKKAALEGAEEVKARANEQTTSQSHNSAVKDDTANEGESGNAHGDLELDSDNDNVDTSIIEPTKAEAEAIARGLQTIKNDDLEEIRELGSGTYGAVYHGKWKGSDVAIKRIKASCFAGRPSERERLIADFWKEALILSSLHHPNVVSFYGIVRDGPDGSLATVTEFMINGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVKQNTLVSGGVRGTLPWMAPELLSGKSNMVSEKIDVYSFGIVMWELLTGDEPYADMHCASIIGGIVNNTLRPQIPTWCDPEWKSLMESCWASDPTERPSFSEISKKLRSMAAQMNVK 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1125 1116 MobiDBLite consensus disorder prediction 773 817 - -
Mibi13g1125 1116 MobiDBLite consensus disorder prediction 776 795 - -
Mibi13g1125 1116 PANTHER SERINE-THREONINE PROTEIN KINASE 88 1109 - -
Mibi13g1125 1116 SMART serkin_6 843 1110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g1125 1116 ProSitePatterns Serine/Threonine protein kinases active-site signature. 968 980 IPR008271 GO:0004672|GO:0006468
Mibi13g1125 1116 Gene3D Transferase(Phosphotransferase) domain 1 929 1116 - -
Mibi13g1125 1116 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 836 930 - -
Mibi13g1125 1116 CDD STKc_MAP3K-like 849 1106 - -
Mibi13g1125 1116 MobiDBLite consensus disorder prediction 1 23 - -
Mibi13g1125 1116 CDD PB1_UP2 36 132 - -
Mibi13g1125 1116 SUPERFAMILY Protein kinase-like (PK-like) 835 1104 IPR011009 -
Mibi13g1125 1116 Gene3D Phosphorylase Kinase; domain 1 829 928 - -
Mibi13g1125 1116 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 52 134 - -
Mibi13g1125 1116 MobiDBLite consensus disorder prediction 1 21 - -
Mibi13g1125 1116 ProSitePatterns Protein kinases ATP-binding region signature. 849 870 IPR017441 GO:0005524
Mibi13g1125 1116 SUPERFAMILY CAD & PB1 domains 49 139 - -
Mibi13g1125 1116 Gene3D - 51 135 - -
Mibi13g1125 1116 MobiDBLite consensus disorder prediction 797 811 - -
Mibi13g1125 1116 Pfam Protein tyrosine and serine/threonine kinase 844 1106 IPR001245 GO:0004672|GO:0006468
Mibi13g1125 1116 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 931 1116 - -
Mibi13g1125 1116 ProSiteProfiles Protein kinase domain profile. 843 1110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g1125 1116 PRINTS Tyrosine kinase catalytic domain signature 962 980 IPR001245 GO:0004672|GO:0006468
Mibi13g1125 1116 PRINTS Tyrosine kinase catalytic domain signature 925 938 IPR001245 GO:0004672|GO:0006468
Mibi13g1125 1116 PRINTS Tyrosine kinase catalytic domain signature 1033 1055 IPR001245 GO:0004672|GO:0006468
Mibi13g1125 1116 PRINTS Tyrosine kinase catalytic domain signature 1077 1099 IPR001245 GO:0004672|GO:0006468
Mibi13g1125 1116 Pfam PB1 domain 48 133 IPR000270 GO:0005515
Mibi13g1125 1116 SMART PB1_new 47 132 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1125 Mibi-ChrMibi13 14848001 14853156 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1125 27 1116 MAP Kinase Kinase Kinase AT5G57610 56.155 0.0 1094
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Mibi13g1125 PK_Tyr_Ser-Thr 2.4e-62 CL0016