Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1116 ATGAGTTTCCACCCTAATACTTCTCTTCACTTAAATCTCCCAGCAGATGACACTAATAATGCTCCATTTCTGAACCTAAATCTTCTTCTTGAGCCTTCTTCATCTTCTGCTGCTTCTTCATGTTCACCAACAGGTTCAAACTCCAAGGAACCAAGAATATTCTCATGCAATTATTGCCAGAAAAAATTCTATAGCTCTCAAGCTCTAGGGGGTCACCAAAATGCTCACAAACTTGAACGAACCCTAGCCAAGAAAAGCAGAGAGCTTATAAGCAGTTCTCCTTCTTCTTCCATTGAACCCAAAAACAATTATACTGGCGGGTCAGGAGGATCCAATCATTATCTCGGCCGTCGGATCGGGTCACCGGAGCTAGGCGTGTTCATGAACAACCATGGTCAAGGTGGAAGGACAAGGGATTTTAGCTATGGTTCGAAGGAAATTGTTCAGGATCAAGATATTAGCCAGCTTGACCTGTCTTTAAGGCTCTAG 489 0.4315 MSFHPNTSLHLNLPADDTNNAPFLNLNLLLEPSSSSAASSCSPTGSNSKEPRIFSCNYCQKKFYSSQALGGHQNAHKLERTLAKKSRELISSSPSSSIEPKNNYTGGSGGSNHYLGRRIGSPELGVFMNNHGQGGRTRDFSYGSKEIVQDQDISQLDLSLRL 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1116 162 MobiDBLite consensus disorder prediction 87 110 - -
Mibi13g1116 162 ProSitePatterns Zinc finger C2H2 type domain signature. 56 76 IPR013087 -
Mibi13g1116 162 Gene3D Classic Zinc Finger 34 106 - -
Mibi13g1116 162 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 9 103 IPR044246 GO:0009788
Mibi13g1116 162 FunFam Zinc finger protein 2 31 100 - -
Mibi13g1116 162 MobiDBLite consensus disorder prediction 86 115 - -
Mibi13g1116 162 ProSiteProfiles Zinc finger C2H2 type domain profile. 54 81 IPR013087 -
Mibi13g1116 162 SUPERFAMILY beta-beta-alpha zinc fingers 51 81 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1116 Mibi-ChrMibi13 14770486 14770974 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1116 1 162 C2H2 Transcription Factor Family AT5G57520 47.727 7.49e-34 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi13g1116 None None None