Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1107 ATGGGAATCGAAAGAGGAAGCCTCAAAGGCTTTCGAGCCTTTAAGCCATGTGACTCATGCAAATCAACAGCCGCCGCTATTTTCTGCCGACCCGACTCAGCTTTCCTCTGTTTGCTTTGCGACTCCAAAATCCACTCCGTTAACAAACTCGCTTCCAGGCACGAACGTGTTTGGATGTGTGAGGTTTGTGAACAAGCCCCTGCCGCTGTCACGTGCAAGGCCGACGCTGCCGTACTCTGTGTCACGTGCGACTCCGATATCCACTCTGCTAATCCCCTCGCTAACCGCCACGACCGTGTACCGGTCGAACCGTTCTTCGATCCTGCCGATTCTGTCGCCAAATCTTCGGCCTCCGCGTTTAATTTCTTGGTTCCGACTGGATCTGAATCTGAATCTGCCGCTTCGTGGCTGATTTCGAGTCAGGATTTTCATCCTAAGGTTTTGGATGTTCCGGATTTGAAATCTGGTGAGATGTTTTTTCCGGAGATGGAGTATTCGTTTCTGGATTTTGATTATTCTAACTCGTTTGATCAGAATGAGAGTAACAGTGGCTGTGGTGGTGGTTGTGGTGGTGGTAATAATAACAACGCTGATAGCGTTGTTCCTGTTCAAGCTACCGTTACGGTTATGAATCACACGGAGAATTGCTTCGACATCGATTTTTGCAGATCGAAGCTCTCTACAATTAGCTATCCAACACCAACACAGTCGTTTAGTCGCCAAAGCATTTCGTCTTCTTCGATTGATGTTGGTGTGGTGCCTGACGGAGGAAATACGGTGTCGGAAATATCTTTTCCGTTCGCCGGAAGCATGAGTAACGGTTCGGAATCAAGCGGAATCGTATCGGCCGGTTTAAATTCAACGAACCAACCGGGAGGTGACTCGATGGGCGGTCTGAACCGGGAGGCCCGGGTTTTGAGGTACAGGGAGAAGAGGAAGAACCGGAAGTTTGAGAAGACTATTCGGTATGCTTCACGGAAGGCTTACGCAGAAACTCGGCCCAGGATCAAAGGCCGGTTCGCTAAACGGACCGAGATGGAGTCGGACTTCGACCGGCTCTTCAGCTCGGTGGACCCCACAACTGATCTATTGCTTGATACTCAGTACGGCGTCGTTCCCTCGTTTTAA 1128 0.5009 MGIERGSLKGFRAFKPCDSCKSTAAAIFCRPDSAFLCLLCDSKIHSVNKLASRHERVWMCEVCEQAPAAVTCKADAAVLCVTCDSDIHSANPLANRHDRVPVEPFFDPADSVAKSSASAFNFLVPTGSESESAASWLISSQDFHPKVLDVPDLKSGEMFFPEMEYSFLDFDYSNSFDQNESNSGCGGGCGGGNNNNADSVVPVQATVTVMNHTENCFDIDFCRSKLSTISYPTPTQSFSRQSISSSSIDVGVVPDGGNTVSEISFPFAGSMSNGSESSGIVSAGLNSTNQPGGDSMGGLNREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEMESDFDRLFSSVDPTTDLLLDTQYGVVPSF 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1107 375 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 16 356 IPR045281 GO:0009909
Mibi13g1107 375 Pfam B-box zinc finger 57 102 IPR000315 GO:0008270
Mibi13g1107 375 Pfam B-box zinc finger 16 57 IPR000315 GO:0008270
Mibi13g1107 375 ProSiteProfiles Zinc finger B-box type profile. 55 102 IPR000315 GO:0008270
Mibi13g1107 375 SMART bboxneu5 60 102 IPR000315 GO:0008270
Mibi13g1107 375 SMART bboxneu5 12 59 IPR000315 GO:0008270
Mibi13g1107 375 ProSiteProfiles CCT domain profile. 301 343 IPR010402 GO:0005515
Mibi13g1107 375 ProSiteProfiles Zinc finger B-box type profile. 12 59 IPR000315 GO:0008270
Mibi13g1107 375 Pfam CCT motif 301 343 IPR010402 GO:0005515
Mibi13g1107 375 CDD Bbox1_BBX-like 16 59 - -
Mibi13g1107 375 CDD Bbox1_BBX-like 60 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1107 Mibi-ChrMibi13 14612406 14613713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1107 13 375 C2C2-CO-like Transcription Factor Family AT5G57660 50.131 6.99e-105 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Mibi13g1107 zf-B_box 1.4e-06 No_clan