Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1104 ATGGACAACCCAAATTATTATTACCATTGTTACCTTATAATATTCTTTTGTGTTGTGTTGTTAACAGTTCAGATCGGTGGGAGCGATGATGCAGGGTCACTCCTAGGAGGGAAGAAGTTGATTATTGGTGTTCCAAAGAAAGTAAAATTCTTCCAGTTTGTGGATACACAACTGAATCCTTTAAACAAGACTCAGCTCTTGAATGTTACTGGCTATTCTATTGACGTTTTCTTGGCTACAATAGCTTACCTTCAACGTTCCAATTACAATATTTCTTTCGAGTTCAGTGCTTTTGTCGACAAAAATGGAGAAACAATTGGGGGTTACGATGCACTCGTCTACCAGGTTCACCAAGGAAAGTACGATGCTGCAGTGGCGGATTTGTCAATTGTGGCAAATAGGTCAAACTTCGTAGATTTCACGTTGCCATATGCACAATCTGATGTGAGGATGCTCGTTAAACTTCGACATGATCCACGCTTGAATATGTGGATTTTCGTACGACCATTTAGTTGGGACATGTGGTTGTGCATTGTCATAGTCTGTATTTTTACAGGAGGTGTCATGCTATTCATGGAACGCAATGTCGCAGAAGATTCAACACTTAAAAAGTCTCCGATTAAGAAACAACTTAGTGGAATTTCTATTTTGTGGCTTCCCATAGTGCAAGCAGTTTTTCCTGAAAGAAAATCATTGGCCAAGAATTGCTCTAGGTTTGTGCTAGTGATGTGGTTGATCCTAGTATTTGTGCTAATGCAAAGTTATACAGCATGCTTGTCATCAATCTTGACCGTACATCAGCTCCAATCTCGTTACCCTAGTGAACATGACATTATAACAGACCCCAACAAATATGTTGGATTTCACTATGGCTCATTTATCGACGGCTTATTGGTTGACAGCTTGAAGATTGATAGGTCAAGGTTGAAGGATTACGCAGGCATCAAACAATATAAGGAGGCCTTAGACAAAGGAAGTCGTAAAGGTGGTGTGGATGCCATTTTTGATGAATTTCCCTACATTCAAGTCTTTCTTACGGAGTATGGTTCCAATTATGCCATGGTAGGGCCTAGGCACCGCACTGGTGGATTTGGTTTTGCATTTCCTAAGAACTCCACCTTAACGTCGCTTTTTTCTCAAGCCATACTAAATATAAGTGAGAGTAAGGAGATGGACGACATTGAGGAGAGATATTTTAAAGATCATGAAAATGAAGGCATATCTACTTCCTCGTTAGATGACGGTAATGGCAGCCTCACCACATATAGCTTTGCAGGGTTGTTTGTACTATTTGGGATTCTTTCACTGTTAGCATTGTTAGTCTCTGAACATCGTATTTGGAGAAGACATGTTATGCTTATGAAAATGTATAGCAAAAAATTGTTGAGCCGTCGGAGTTCTTTAGTAACTAATTTGTCAGAAGAAGGTTCTGGAACAATAAGAAATGTTGTTGACGATGAAGATGATAAAGAAGGTTCTATAAGCAGAGAAAATATTGGATCAGGACAACATGTTGAATATAATCACACAAGGATATTGGTGGCATCTCTCCCCTAA 1557 0.3937 MDNPNYYYHCYLIIFFCVVLLTVQIGGSDDAGSLLGGKKLIIGVPKKVKFFQFVDTQLNPLNKTQLLNVTGYSIDVFLATIAYLQRSNYNISFEFSAFVDKNGETIGGYDALVYQVHQGKYDAAVADLSIVANRSNFVDFTLPYAQSDVRMLVKLRHDPRLNMWIFVRPFSWDMWLCIVIVCIFTGGVMLFMERNVAEDSTLKKSPIKKQLSGISILWLPIVQAVFPERKSLAKNCSRFVLVMWLILVFVLMQSYTACLSSILTVHQLQSRYPSEHDIITDPNKYVGFHYGSFIDGLLVDSLKIDRSRLKDYAGIKQYKEALDKGSRKGGVDAIFDEFPYIQVFLTEYGSNYAMVGPRHRTGGFGFAFPKNSTLTSLFSQAILNISESKEMDDIEERYFKDHENEGISTSSLDDGNGSLTTYSFAGLFVLFGILSLLALLVSEHRIWRRHVMLMKMYSKKLLSRRSSLVTNLSEEGSGTIRNVVDDEDDKEGSISRENIGSGQHVEYNHTRILVASLP 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1104 518 SMART GluR_14 39 401 IPR001320 GO:0015276|GO:0016020
Mibi13g1104 518 CDD GluR_Plant 38 399 - -
Mibi13g1104 518 Gene3D - 33 163 - -
Mibi13g1104 518 Gene3D - 164 290 - -
Mibi13g1104 518 Pfam Ligand-gated ion channel 401 433 IPR001320 GO:0015276|GO:0016020
Mibi13g1104 518 Gene3D - 315 364 - -
Mibi13g1104 518 SUPERFAMILY Periplasmic binding protein-like II 11 401 - -
Mibi13g1104 518 Gene3D - 365 399 - -
Mibi13g1104 518 Pfam Bacterial extracellular solute-binding proteins, family 3 97 400 IPR001638 -
Mibi13g1104 518 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 37 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1104 Mibi-ChrMibi13 14494669 14498214 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1104 37 441 Ion Channels AT2G29120 38.272 2.19e-75 254