Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1103 ATGGCGAACTCAAATTACGTTGCCACTACTTTCGCAGTAATATTATTAATAGCTCAGATTGGAGCAGGTGATGATGATGAAGGTTCACTAATCCTGGAAGGGAAGAAGAAGTTGATTGTTGGTGTTCCTAAGAAATGTAGCTCAACAGACATTTTTGTGGATTTAAAACTTGATCCTGCAAATAAAAGTCAGGTCGAGAATGCTCAGGGCTATTCCATTGAGGTTTTCAATGCTACAATATCGTATCTTCAGAATATTTCTGTAGAGTATTTTGCCTTCTCAAATGAAGATGGAAGTTGTGTTGAGAATTACGACGCACTCCTCGAACAGCTCTATAAAAGAAAGGTTAGAGACTACACAATCTTGTATACGTATGGTGCAGTGGTGGGAGATGTGACCATTTTGGCAAATCGTTCCAACTACGTAGATTTTACTTTACCATATACACAGTCTGATATGAAGATGCTGGTGAAGTTTCGACATGATCCACGGTTAGATATGTGGATTTTTGTTCGACCTTTTACTTGGGATCTGTGGTTGTCCATTGCCATCATATGTGTTTTTATAGGAGGTATCATATTATTCATGGAACGAAATGTTAAGCAAGATTCAAAGAAGCAACTTAATGGGGCTTCTATTCTATGGCTCCCCGTAGTGCAAGCAGTTCTTCCTGAAAAATCTCCGGCCAAGAATTGCTCTAAATTTGTGCTTGTGTTGTGGCTGATATTAGCATTTGTGCTAATGCAAAGTTACACAGCATGCTTGTCATCAATCTTGACCGTACATCAGCTTCAACCTCGTTACCTTAGTGAGTATGATGTTATAAATGACCCCCACATTCACATTGGATACCATGGTAGCTTATTAATTAGAGGCTTGTTGTTGGAGAGATTGAAAGTTGAGAAGTCAAGGGTGAAGAACTATTCAACCGTTGAACAATACAAGGAGGCCTTAGATAAAGGAAGCAGTAAAGGTGGTGTCGATGCTATTTTTTATGAAGTTCCCTACATTAAGGTCTTCCTCAAAAAATATGGTTCTAAATATGCAGTGATTGAAACTAAGCACCGCACTGGTGGATTTGGCTTTGCATTCCCCAAAGGATCCACCTTAACTTCACGCTTTTCCAGTGCAATATTGAATGTTCGTGAAAGTTCAAAAATGGATGATATTGAGCGTAAATATTTTGGAAGCAGTAACAACGATGAAAACGAAAGCATATCTGATTCAACGTTAGATGATGATACAAATCAAACCAGCCTCACTACTTATAGCTTTGCAGGCTTGTTCTTGTTAATTGGAATTTTTTCACTATCAGCTGTGATAGTCTCTGAAAGTCGTATTTGGCAAAAACCTATTAAAGCAAAAATGTGTATCCAACGATTCTTGAGTCGGAGTTTTACAAGAACTAATCCACTAGAGGAAAGTTCAATTACAGGAAGAAATATTGACAAAGAAGATTCAGGAATCAAAGAAAATACAAGCTTAGATAATAGAGATGATGATCGAGGAAAACTCTCCATGACATCGCTTACATGTGTTGAAACTAAAACAATGCCTGTGTAA 1563 0.3788 MANSNYVATTFAVILLIAQIGAGDDDEGSLILEGKKKLIVGVPKKCSSTDIFVDLKLDPANKSQVENAQGYSIEVFNATISYLQNISVEYFAFSNEDGSCVENYDALLEQLYKRKVRDYTILYTYGAVVGDVTILANRSNYVDFTLPYTQSDMKMLVKFRHDPRLDMWIFVRPFTWDLWLSIAIICVFIGGIILFMERNVKQDSKKQLNGASILWLPVVQAVLPEKSPAKNCSKFVLVLWLILAFVLMQSYTACLSSILTVHQLQPRYLSEYDVINDPHIHIGYHGSLLIRGLLLERLKVEKSRVKNYSTVEQYKEALDKGSSKGGVDAIFYEVPYIKVFLKKYGSKYAVIETKHRTGGFGFAFPKGSTLTSRFSSAILNVRESSKMDDIERKYFGSSNNDENESISDSTLDDDTNQTSLTTYSFAGLFLLIGIFSLSAVIVSESRIWQKPIKAKMCIQRFLSRSFTRTNPLEESSITGRNIDKEDSGIKENTSLDNRDDDRGKLSMTSLTCVETKTMPV 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1103 520 Gene3D - 286 402 - -
Mibi13g1103 520 Gene3D - 167 285 - -
Mibi13g1103 520 Pfam Bacterial extracellular solute-binding proteins, family 3 127 396 IPR001638 -
Mibi13g1103 520 SMART GluR_14 37 397 IPR001320 GO:0015276|GO:0016020
Mibi13g1103 520 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 33 450 - -
Mibi13g1103 520 MobiDBLite consensus disorder prediction 477 503 - -
Mibi13g1103 520 MobiDBLite consensus disorder prediction 393 413 - -
Mibi13g1103 520 Gene3D - 33 166 - -
Mibi13g1103 520 SUPERFAMILY Periplasmic binding protein-like II 16 397 - -
Mibi13g1103 520 MobiDBLite consensus disorder prediction 478 503 - -
Mibi13g1103 520 MobiDBLite consensus disorder prediction 399 413 - -
Mibi13g1103 520 Pfam Ligand-gated ion channel 397 433 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1103 Mibi-ChrMibi13 14422472 14425243 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1103 24 442 Ion Channels AT2G29120 36.879 3.14e-65 226