Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1102 ATGGCAAACCAAAATTACTATTTTTATGGCGTCAACATTATGGTTTTTTGTGTTGTGTTGTTAATAGTTCCGATTAGTGCAGGTGATGATGATGCAGGATCAGTTTTCCTGAGAGGGAAGAAATTGATAATTGGACTTCCTTATTATTTAGGCCAAACCCAACTTGTGGATATTGAGCAACTCAATGATACTAATAGCAATCATCAGGTCGTCCGTGCTAGGGGCTATTCTATTGAAGTCTTCGAAGCTTCAATAGACTACCTCAATCGTTCACATAATTACAATATCTCTTTCGAGTATAGAGCTTTTGTAGACGAACATGGAAATAGTGCTGGGGATTACAACCAACTCGTCCGCCAAATTTCTCAAGAAAAGTATGATGCCGTGGTGGGAGACGTGACGATTTTGGCAAATCGGTTGGACGATGCAGATTTTACGGTACCATATACGCGTTCTAATGTGAAGATGCTTGTGAAACTTCAACATGATCCACGGTTGAATATGTGGATTTTTGTGCGACCGTTTAGTTGGAGTCTTTGGTTGTCCATAGCTATCATTTCCATTTTTATAGGAGCAATCATACTGTTCATGGAACGTAATGTCAAAAGAGATTCAACACTTTCATCATGTAGGAAACAATTTCGTGGGGCTTCTATCTTGTGGCTTCCTTTTATGCAAGCAGTTTTTCCTGAAAGAGAATCGTTGGCCAAAAATTGCTCAAGGTTTGTGCTGATGATGTGGTTGATACTGGCATTTCACAAGGGCTCCACCTTAACCTCAAACTTTTCTAAAGCCATATTAAATATCAGCGAGAGTAATATAATGGACGAAATTGAGGAGAGATATTTTGGAGGCAACAATGAAGATGGCGAAAATCAAGACCTATCTAATTCATCATCATCATCATCGAATGATGTTAGTCCCAGTCTTACTGCTTACAGCTTTGCAGGTTTGTTCATGGTTATTGGAATTCTTTCACTGTTAGCTTTAGCAGTCTCTGAAAGTCATATTTGGCGAAAACCTGTTAGCTATAGCCGACAATTCTTGAGTCGAAGTTCTGCAAGAATTAGTTCATCAGACGAAGAAGGTTCTACAACAAGAGATGCCGACAAAGAATGTTCTTTAGACAAACAAAATATTGGATCAGATAATGGAGCAGAAAATAAAACACTACCTGTGTAA 1182 0.3866 MANQNYYFYGVNIMVFCVVLLIVPISAGDDDAGSVFLRGKKLIIGLPYYLGQTQLVDIEQLNDTNSNHQVVRARGYSIEVFEASIDYLNRSHNYNISFEYRAFVDEHGNSAGDYNQLVRQISQEKYDAVVGDVTILANRLDDADFTVPYTRSNVKMLVKLQHDPRLNMWIFVRPFSWSLWLSIAIISIFIGAIILFMERNVKRDSTLSSCRKQFRGASILWLPFMQAVFPERESLAKNCSRFVLMMWLILAFHKGSTLTSNFSKAILNISESNIMDEIEERYFGGNNEDGENQDLSNSSSSSSNDVSPSLTAYSFAGLFMVIGILSLLALAVSESHIWRKPVSYSRQFLSRSSARISSSDEEGSTTRDADKECSLDKQNIGSDNGAENKTLPV 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1102 393 MobiDBLite consensus disorder prediction 289 305 - -
Mibi13g1102 393 MobiDBLite consensus disorder prediction 355 393 - -
Mibi13g1102 393 MobiDBLite consensus disorder prediction 378 393 - -
Mibi13g1102 393 MobiDBLite consensus disorder prediction 283 305 - -
Mibi13g1102 393 MobiDBLite consensus disorder prediction 361 377 - -
Mibi13g1102 393 Pfam Ligand-gated ion channel 176 324 IPR001320 GO:0015276|GO:0016020
Mibi13g1102 393 SMART GluR_14 60 285 IPR001320 GO:0015276|GO:0016020
Mibi13g1102 393 Pfam Ligated ion channel L-glutamate- and glycine-binding site 65 160 IPR019594 GO:0004970|GO:0016020
Mibi13g1102 393 Gene3D - 35 168 - -
Mibi13g1102 393 SUPERFAMILY Periplasmic binding protein-like II 16 286 - -
Mibi13g1102 393 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 250 342 - -
Mibi13g1102 393 Gene3D - 169 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1102 Mibi-ChrMibi13 14409142 14412234 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1102 38 276 Ion Channels AT2G24710 33.473 2.35e-34 133