Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1097 ATGTACGGTGCTGTGGTGGGAGATGTGACAATTGTGGCAAATCGTTCCGACTATGTAGATTTTACTTTACCGTATACACAATCTAATGTGAAAATGTTGGTGAAGCTTCGACATGATCCACGCTTGAATATGTGGATCTTTGTACGACCTTTTAGTTGGGATTTATGGTTGTCCATTTCCGTTGTGTGTGTTTTTATAGGAGGTATCATACTGTTCATGGAACGTAATGTTAAACAAGATTCAGGACTTGAAAATCCGACATATAAGAAGCAACTTAGTGGAGTTTCTATACTATGGTTTCCTGTAGTACAAGCGATTCTTCCTGACAAAGAATCATTGGCCAAGAATTGCTCTAAGTTTGTGCTTGTGTTGTGGTTGATATTAGCATTTGTGCTAATGCAAAGTTACACTGCATGCTTGTCATCAATCTTGACTGTACATCAGCTCCAACCTCGTTACCCTAGTGAATATGATGTTATAAGTGACCCCAACATTAAGATTGGATTTCAGGGTGGCTCATTCATTAAAGCCTTATTGGTGGAGAAATTAAAAGTTGACAGTTCAAGGGTGAAGAAGTATTCAACCATTAAACAATATAAAGATGCCTTAGATAAAGGAAGCAGTGAAGGTGGTGTCGATGCTATTTTTGATGAAGTTCCCTACATTAAGGTCTTCCTCAAAAAATATGGCTCTAAATTCACCATGATTGAAACTGGGCACCGCACTGGTGGATTTGGTTTTGCATTCCCCAAAGGGTTCAGCTTAACCTCAAACTTTTCCAGTGCCATATTGAAGGTGCGTGAGAGTACAAAAATGGATGATATTGAGCATAAATATTTTGGAAGCAGTAACAACGATGAAGGACAAAGCCTATCTAATTCATCGTTAGATGAAGCAAGTCCAAGCAACCTCACTACTTATAGCTTTGCTGGTTTGTTCATTTTAATTGGAATTTTTTCAATGCTAGCTTTGATAGTGTCTGAAAATCATATTTGGCGAAAACCTATTATCATAGCACAAACATATATCCATGGATACTTGAGTCGGAAATTTACAAGAACTAATCCATTAGAGGAAGGTTCTATTTCAAGAAGAAATATTGACAAAGAAGGTTCAACAAATGCAGAAAATATTGGCTCATCAGATGATATATAA 1155 0.3714 MYGAVVGDVTIVANRSDYVDFTLPYTQSNVKMLVKLRHDPRLNMWIFVRPFSWDLWLSISVVCVFIGGIILFMERNVKQDSGLENPTYKKQLSGVSILWFPVVQAILPDKESLAKNCSKFVLVLWLILAFVLMQSYTACLSSILTVHQLQPRYPSEYDVISDPNIKIGFQGGSFIKALLVEKLKVDSSRVKKYSTIKQYKDALDKGSSEGGVDAIFDEVPYIKVFLKKYGSKFTMIETGHRTGGFGFAFPKGFSLTSNFSSAILKVRESTKMDDIEHKYFGSSNNDEGQSLSNSSLDEASPSNLTTYSFAGLFILIGIFSMLALIVSENHIWRKPIIIAQTYIHGYLSRKFTRTNPLEEGSISRRNIDKEGSTNAENIGSSDDI 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1097 384 Gene3D - 44 193 - -
Mibi13g1097 384 Gene3D - 2 43 - -
Mibi13g1097 384 Pfam Ligand-gated ion channel 282 317 IPR001320 GO:0015276|GO:0016020
Mibi13g1097 384 Gene3D - 231 287 - -
Mibi13g1097 384 Pfam Bacterial extracellular solute-binding proteins, family 3 4 281 IPR001638 -
Mibi13g1097 384 SMART GluR_14 1 282 IPR001320 GO:0015276|GO:0016020
Mibi13g1097 384 MobiDBLite consensus disorder prediction 362 384 - -
Mibi13g1097 384 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 3 334 - -
Mibi13g1097 384 SUPERFAMILY Periplasmic binding protein-like II 4 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1097 Mibi-ChrMibi13 14354393 14356647 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1097 2 326 Ion Channels AT2G29120 42.154 2.19e-63 216