Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1096 ATGGCAAACCCAAATTACCGTTTCTATAGCTCTGAGTACGTTACCATAACACTTTTTTCAGTATTGTTATTAATAGCTCAAATTGGAGCAACTGAAGAAGATGCAGGTTCACTAGTCCTGGAAGGGAAGAAGAAGATGATAGTTGGTGTTCCTAAGAAATGTGGCTTGATTGATTTCGTGGATTTAACACTGGATTCTACAAATAAGAGTCGGGTCGAGAAGGCTGAGGGCTATTCCATTCAGGTTTTCAATGCTACAATGGCGTATCTTGAGAAGATTTCCGTAGAGTATGTGGCCTTCGCAAATGAAGATGGAAGTTGTGTTGAGGATTACGACGCACTCCTCGACCAGATCTCTAAAGGAAAGTACGGTGCTGTGGTGGGAGATGTGACAATTGTGGCAAATCGTTCCGACTATGTAGATTTTACTTTACCATATACACAATCTAACGTGAAAATGTTGGTGAAGCTTCGACGTGATCCACGCTTGAATATGTGGATCTTTGTACGACCTTTTAGTTGGGATTTATGGTTGTCCATTTCCATTGTGAGCGTTTTTATCGGAGGTATCATACTGTTCATGGAGCGTAATGCCAAACAAAATTCAGGACTTGAAAATTCGCCATATAAGAAGCAACTTAGTCGAGTTTCTATACTATGGTTTCCTGTGGTACAAGCGATTCTTCCTGAAAAAGAATCATTAGCCAAGAATTGCTCTAAGTTTGTGCTTGTGTTGTGGTTGATATTAGCATTTGTACTAATGCAAAGTTACACAGCATGCTTGTCATCAATCTTGACCGTGCATCAGCTTCAACCTCGTTACCCTAGTGAATATGATGTTATAAGTGACCCCAACATTAAGATTGGATTTCAGGGTGGCTCATTCATTAAAGGCTTGTTGGTGAGGAAATTGAAAGTTGACAATTCAAGGGTGAAGAAGTATTCAACCATTGAACAATATAAGGACGCCTTAGATAAAGGAAGTAGTGAAGGTGGTGTTGATGCTATTTTTGATGAAGTTCCCTACATTAAGGTCTTCCTCAAAAAATATGGCTCTAAATTCACCATGATTGAAACTGGGCACCGAACTGGTGGATTTGGTTTTGCATTCCCAAAAGGCTCCAGCTTAACTTCAAACTTTTCCAATGCCATATTGAAGGTGCGTGAGAGTACAAAAATGGATGATATTGAGCGTAAATATTTTGGAAGCAGTAACAACGATGAAGGGCAAAGCCTATCTAATTCATCGTTAGATGAAGCAAGTCCAACCAACCTCACTACTTATAGCTTTGCTGGTGTGTTCATTTTAATTGGAATTTTTTCACTGCTAGCTTTGGTAGTGTCTGAAAATCATATTTGGCGAAAACCTATTATCATTGCACAAACATATATCCATGGATACTTGAGTCGGAGATTTACAGGAACTAATCCATTAGAGGAAGGTTCTATTTCAAGAAGAAATATTGACAAAGAAGGTTCAACAAATACAGAAAATATTGGATCGTGA 1506 0.3884 MANPNYRFYSSEYVTITLFSVLLLIAQIGATEEDAGSLVLEGKKKMIVGVPKKCGLIDFVDLTLDSTNKSRVEKAEGYSIQVFNATMAYLEKISVEYVAFANEDGSCVEDYDALLDQISKGKYGAVVGDVTIVANRSDYVDFTLPYTQSNVKMLVKLRRDPRLNMWIFVRPFSWDLWLSISIVSVFIGGIILFMERNAKQNSGLENSPYKKQLSRVSILWFPVVQAILPEKESLAKNCSKFVLVLWLILAFVLMQSYTACLSSILTVHQLQPRYPSEYDVISDPNIKIGFQGGSFIKGLLVRKLKVDNSRVKKYSTIEQYKDALDKGSSEGGVDAIFDEVPYIKVFLKKYGSKFTMIETGHRTGGFGFAFPKGSSLTSNFSNAILKVRESTKMDDIERKYFGSSNNDEGQSLSNSSLDEASPTNLTTYSFAGVFILIGIFSLLALVVSENHIWRKPIIIAQTYIHGYLSRRFTGTNPLEEGSISRRNIDKEGSTNTENIGS 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1096 501 SUPERFAMILY Periplasmic binding protein-like II 35 403 - -
Mibi13g1096 501 MobiDBLite consensus disorder prediction 403 419 - -
Mibi13g1096 501 Gene3D - 166 289 - -
Mibi13g1096 501 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 41 455 - -
Mibi13g1096 501 SMART GluR_14 45 403 IPR001320 GO:0015276|GO:0016020
Mibi13g1096 501 Gene3D - 290 356 - -
Mibi13g1096 501 MobiDBLite consensus disorder prediction 399 419 - -
Mibi13g1096 501 Pfam Bacterial extracellular solute-binding proteins, family 3 74 402 IPR001638 -
Mibi13g1096 501 Gene3D - 357 408 - -
Mibi13g1096 501 Pfam Ligand-gated ion channel 403 438 IPR001320 GO:0015276|GO:0016020
Mibi13g1096 501 Gene3D - 41 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1096 Mibi-ChrMibi13 14270470 14273662 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1096 44 447 Ion Channels AT2G29120 39.901 4.51e-76 255