Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1094 ATGGCAACCCCAAATTACTATTATGGCTGCCTTCTAATAATTACCTCTGTTGCGTTGTTAAAAGCTCAGATTGGAGAAGGAGATGAAGAAGCTGGTTCACTACTAGGAGGGAAGAAACTAATAAGTGGACTTCCTAAGAAATCAGGCTTCACCCAGTTTGTGGATTTACAACTCAATGATAGTGATAAGACACAGGTCGTCAAAGCTACAGGCTATTCCATTGACGTCTTCGAAGCTGCAATATCATACCTCAAGAGTTCACATCACAATATTTCTTTCGAGTTCAGGGCTTTTGTAGACAAAAATGGAAACAGTGCTGGGGATTACGATGCACTCGTCTATCAGGTTTTTGAGGGAAAGCTTCGCAATGATCCACGGTTAAATATGTGGATTTTTGTGCGACCATTCAGCTGGGATCTATGGTTGTCTATTGCCATCTTCAGTATTTTTATCGGAGTTATCATATTCTTCATGGAACGTAAAGTTAAGGAGGATTCAACATTAGAAAATTCACTATATAGAAAACAAGTTACTGGGGTTTCCATCTTGTGGCTTCCAGTAAAACAAGCCGTTCTTCCTCAAAAAGAAGCATTGGTCAAGAATTTCTCCAAGTTTGTGTTAGTGATGTGGTTGATTCTAGTATTTATACTAATGCAAAGTTACACAGCAAGCCTGTCGTCAATATTAACAGTACATCAGCTAAAACCTCGTTACCTTAGTGAGAATGACGTTACAAGAGGCCCTAACATTAACATTGGATACCACCGTGACTCTTTCGTCGGAAGTTTATTGGTCAATGGGTTGAAGGTTGATAGGTCGAGGGTGAAGGACTACACTGACATTGAAGAATTTAAGGACGCTTTGGATAAAGGAAGCCATCAAGGTGGTGTTGATGCTATTTTTGATCAGATTTCTCATGTTAAGGTCTTCCTCAAGAAATATGGTTCCAATAATTATGCCATGATCGATACTAAACATCGCATTGATGGATTTGCTTTTGCATTTACCAAGGGCTCCAACGTAACCTCGTACTTTTCTACAGCCATATTAAATGTGAGAGAGAGTGATGAAATGGACAAGATTGAGGAAAAATATTTTGGAAGCAATCAAGAGGACAATATTGAAGGCCAAGGCTTATCTTCTTCTTCATCAGCCGATGCAATTTCCAACCTTTCTACTTATAGCTTTGGAGGCATGTTCATAGTGATTGGAAGTATTTCAGTTTTAGCTTTGCTAGTCTCTGAAACTCGTCGTATTTGGCAAAAACCTGTTGTGCTCGTAAAAGCGTGTAGCCGACAACTGATGACGGGTTTGAGTTTTACAAGAACTAGCCCAACTGAGGAAGGTTCTCCAGCAAGAAATCTTGATGGAGAAGGTTTTCCGAGTAGAGAAAATGATCAAAATATTGGATCGGAAGAGCTGTATTTATATGGACAAATCTAA 1443 0.3936 MATPNYYYGCLLIITSVALLKAQIGEGDEEAGSLLGGKKLISGLPKKSGFTQFVDLQLNDSDKTQVVKATGYSIDVFEAAISYLKSSHHNISFEFRAFVDKNGNSAGDYDALVYQVFEGKLRNDPRLNMWIFVRPFSWDLWLSIAIFSIFIGVIIFFMERKVKEDSTLENSLYRKQVTGVSILWLPVKQAVLPQKEALVKNFSKFVLVMWLILVFILMQSYTASLSSILTVHQLKPRYLSENDVTRGPNINIGYHRDSFVGSLLVNGLKVDRSRVKDYTDIEEFKDALDKGSHQGGVDAIFDQISHVKVFLKKYGSNNYAMIDTKHRIDGFAFAFTKGSNVTSYFSTAILNVRESDEMDKIEEKYFGSNQEDNIEGQGLSSSSSADAISNLSTYSFGGMFIVIGSISVLALLVSETRRIWQKPVVLVKACSRQLMTGLSFTRTSPTEEGSPARNLDGEGFPSRENDQNIGSEELYLYGQI 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1094 480 MobiDBLite consensus disorder prediction 440 466 - -
Mibi13g1094 480 Pfam Ligand-gated ion channel 137 404 IPR001320 GO:0015276|GO:0016020
Mibi13g1094 480 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 37 117 - -
Mibi13g1094 480 SMART GluR_14 39 368 IPR001320 GO:0015276|GO:0016020
Mibi13g1094 480 SUPERFAMILY Periplasmic binding protein-like II 29 369 - -
Mibi13g1094 480 Gene3D - 126 260 - -
Mibi13g1094 480 Gene3D - 261 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1094 Mibi-ChrMibi13 14207319 14211755 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1094 37 422 Ion Channels AT5G11210 30.024 4.33e-55 195