Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1093 ATGGCAACCCCAAATTACTATTATTTCTGTGGCTACCTTGTAACGATTTCTTGTGTTGTGTTGTTAATAGCTCAGATTGGAGCAGGCGATGAAGTAGGTTCAGTACTACTAGAAGGGAAGAAGTTAATAATTGGACTTCCTAAGAAATCAGGCTTCAGAGAATTTGTGGATTTACAACTCAATGATATTGATAAGACACAGGTCGTCAAGGCTACAGGCTATTCCATTGACGTCTTCAAAGCTGCAATAGCTTTCCTTGAGCGTTCTCATTACAATGTTTCTTTCGAGTATAGAGCTTTTGTAGACAATGATGGAAACAGTGCTGGCAATTACGATGCACTCATCTATCAGATTTTTGAAAACAAGTATGATGCTGTGGTGGGAGATCTGTCGGTTTTGGCAAATCGATCAAAGTACGTTGATTTTACATTGCCATATGCACCGTCTGAGGTGAAGATGCTTGTGAAGGTTCGCCGTGATCCTCGCTTGTATTGGTGGAATTTGGTGAGACCATTTAGTTGGGATCTATGGTTATCAATTGGCATCTTTAGTATATTTATAGGAGGTATCATATTTTTAATGGAACGTTCTGTCAAGGGAAATTCAACATTAAGGAAACAACTCAGTGGGGTTTCTATCTTGTGGCTTCCAGTAGAACAAGCAGTTCTTCCTGAAAGAGAAGCGTTGATAAAAAATTGCTCTAAGTTTGTGTTGGTGATGTGGTTGATACTGGCATTTGTGCTGATGCAAAGCTACACAGCAAGCTTGTCATCAATATTGACAGTACATCAGTTACAACCTCTTTACCCTAGCGAGCATGACATTGTAAAAGATCTTGACATTAATGTTGGATACCACACTGAATCCTTCATCAGAGATTTACTGGTCAAAACCGTGAAGATTGATAAGTCGAGGGTGAAGAACTACGCTAACATTAAAGAATATAAGGACGCTTTAGACAAAGGTAGCCATAAAGGTGGAGTGGATGCTATTTTTGATCATACTTCCCACATTAAGACGTTCCTCAACCATTATGGTTCCAATGATTATGCCATGGTCGACACTAGACATCGCATTGATGGGTTTGCTTTTGCCTTCCCCATTGGTTCCAACTTAACCTCGTACTTTTCCAGAGCCATATTAAATGTGAGAGAGAGTGAATACATGGGCGAGATAGAGGAAAAATATTTTGGAAGCAATGAAGAGGACAATGAAGGCCAAGGCTCATCTACTTCATCATCATCATCAGACGATGCGAGTTCCAGTCTTACCACTTATAGCTTTGCAGGTTTGTTCATGGTGAATGGAATTCTTTCACTTTTAGCTTTTGCAGTCTCTGAAAGTCATATTTGGCGAAGACCTGTTGTGCTGGCAAAAACTTATAGCCAAAAATGGCTGATGAGTTGGAGTTTTAGAAGAACTAGTCCATTAGAGGAAGGTTCTACAACAGGAGGAGATGTTGATGGAGAAGATATTGCAACCAGAGAAAATAATCATAGTATTGGCTTCGAAGTGGAGCATGTATAA 1527 0.3975 MATPNYYYFCGYLVTISCVVLLIAQIGAGDEVGSVLLEGKKLIIGLPKKSGFREFVDLQLNDIDKTQVVKATGYSIDVFKAAIAFLERSHYNVSFEYRAFVDNDGNSAGNYDALIYQIFENKYDAVVGDLSVLANRSKYVDFTLPYAPSEVKMLVKVRRDPRLYWWNLVRPFSWDLWLSIGIFSIFIGGIIFLMERSVKGNSTLRKQLSGVSILWLPVEQAVLPEREALIKNCSKFVLVMWLILAFVLMQSYTASLSSILTVHQLQPLYPSEHDIVKDLDINVGYHTESFIRDLLVKTVKIDKSRVKNYANIKEYKDALDKGSHKGGVDAIFDHTSHIKTFLNHYGSNDYAMVDTRHRIDGFAFAFPIGSNLTSYFSRAILNVRESEYMGEIEEKYFGSNEEDNEGQGSSTSSSSSDDASSSLTTYSFAGLFMVNGILSLLAFAVSESHIWRRPVVLAKTYSQKWLMSWSFRRTSPLEEGSTTGGDVDGEDIATRENNHSIGFEVEHV 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1093 508 Gene3D - 166 310 - -
Mibi13g1093 508 MobiDBLite consensus disorder prediction 398 419 - -
Mibi13g1093 508 FunFam Glutamate receptor 37 162 - -
Mibi13g1093 508 SMART GluR_14 41 399 IPR001320 GO:0015276|GO:0016020
Mibi13g1093 508 Pfam Bacterial extracellular solute-binding proteins, family 3 70 398 IPR001638 -
Mibi13g1093 508 Gene3D - 34 165 - -
Mibi13g1093 508 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 38 453 - -
Mibi13g1093 508 SUPERFAMILY Periplasmic binding protein-like II 16 400 - -
Mibi13g1093 508 Pfam Ligand-gated ion channel 399 436 IPR001320 GO:0015276|GO:0016020
Mibi13g1093 508 MobiDBLite consensus disorder prediction 402 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1093 Mibi-ChrMibi13 14152044 14155918 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1093 37 475 Ion Channels AT2G29100 36.044 7.29e-72 244