Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1092 ATGACAATTCCAAAACACTATTATGGCTGCCTTCTAATAATTACCTGTGTTGCGTTGTTAACAGCAGAGATTGGAGCAGGAGATGGAGATGCTGGTTCACTCCTAGGAGGTAATAAATTAATAATTGGACTTCCTAAAAAATCAAACTGGGTTCAGTTTATGGATTTACAACTCAATTCAAGTAATAAGATTCAGGTCGTCAAGGCTACAGGCTATTCCATTGACGTCTTCGAAGCTGCAATAGCTTTCCTTAAGAGTTTGGATTACAATATTTCTTTCGAGTATAGAGCTTTTGTAGACGATGATGGAAACAATGCTGGGGATTACGACGCACTCATCTATCAGATTTTTGAAGGAAAGTATTATGACGCTGTGGTGGGAGATTTGTCAATTGTGGCGAATCGGTCAAATTATGTAGATTTTACTTTGCCATATGTGCCATCTGATGTGAAGATGCTCGTGAAGGTTCGTCATGATCCACGATTGAATATGTGGAATTTTATAAAGCCATTTAGATGGGATCTATGGTTGTCCATAGTCATCTTTAATATTTTAATAGGAGGTGTCATATTGTTTATGGAGCGTGCTGTTGAGGAAGATTCCATACGTGAACATTCACCACCCAGGAAACAAGTCATAAAGTTCTCTATGATTCTGTGGCTTCCTGTGATTCAAGCAGTTCTTCCAGAGAGAGAATCAGTGTCTAAAGCATGCTCTAGGTTTGTGTTGGTAATATGGTTGATACTAGTATTCGTGCTCATGCAAAGTTACACAGCATGCTTGTCATCGATCTTGACCGTACATCAGTTGCAACCTAGTTACCCTACTGAGAAAGATGTTATAAACAATCCCAACATTTACATTGGATATCCTGGTGCCTCATTCTTAAGAGGCATATTTGTTGATCACATGAAGATTGATAGATGGAGGATGAAGAAATTCTACGCTGTTAAACAGTATAAGGAGGCTTTGGACAAAGGAAGCCAAAGAGGTGGTATCGATGCTTATTTTGATGAAGTTCCCTACTTAAAACTTTTCCTCAAGCAATACGGCTCTAATTATGCCTTGATCAACACTAGGCACAGGAATGATGGATATGGTTTTGTGAGTATTTCCCTCTCAAACTTTCGTGAAGGATTTAGATTTCCTATTGCATTTCCAAAAGGCTCCAACTTAACCTCGTACTTTACTAGAGCCATATTAAATGTGAGAGAGAGTGAAGAAATGGACCTGATTGAGCAGAAATATTTTGGAAGCAGCATTAATAATAAAGATGATGAAGGACAAGGCCAATCAAATGCATCATCAGACGACAATGCAAGTCCTAGCCTTACTGCTTATAGTTTTGCTGGTCTCTTCATGGTCATTGGAATGCTATCACTCTTAGCTTTACTAGTTTCGGAGCGTCGTGTATGGATAAACTCCGTTGTTCTGGTAAAAACGTGTAGCCAACAATTATTGAGTCAGAATTTTAGAAGATAA 1482 0.386 MTIPKHYYGCLLIITCVALLTAEIGAGDGDAGSLLGGNKLIIGLPKKSNWVQFMDLQLNSSNKIQVVKATGYSIDVFEAAIAFLKSLDYNISFEYRAFVDDDGNNAGDYDALIYQIFEGKYYDAVVGDLSIVANRSNYVDFTLPYVPSDVKMLVKVRHDPRLNMWNFIKPFRWDLWLSIVIFNILIGGVILFMERAVEEDSIREHSPPRKQVIKFSMILWLPVIQAVLPERESVSKACSRFVLVIWLILVFVLMQSYTACLSSILTVHQLQPSYPTEKDVINNPNIYIGYPGASFLRGIFVDHMKIDRWRMKKFYAVKQYKEALDKGSQRGGIDAYFDEVPYLKLFLKQYGSNYALINTRHRNDGYGFVSISLSNFREGFRFPIAFPKGSNLTSYFTRAILNVRESEEMDLIEQKYFGSSINNKDDEGQGQSNASSDDNASPSLTAYSFAGLFMVIGMLSLLALLVSERRVWINSVVLVKTCSQQLLSQNFRR 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1092 493 SUPERFAMILY Periplasmic binding protein-like II 11 420 - -
Mibi13g1092 493 SMART GluR_14 39 419 IPR001320 GO:0015276|GO:0016020
Mibi13g1092 493 Gene3D - 165 294 - -
Mibi13g1092 493 Gene3D - 33 164 - -
Mibi13g1092 493 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 37 471 - -
Mibi13g1092 493 Pfam Bacterial extracellular solute-binding proteins, family 3 68 418 IPR001638 -
Mibi13g1092 493 Pfam Ligand-gated ion channel 419 457 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1092 Mibi-ChrMibi13 14119231 14121838 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1092 37 466 Ion Channels AT2G29120 36.279 2.12e-68 234