LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi13g1091	ATGGAAACCCCAAATTACTACTTTTGCTATGGCTACCTTGTAAAGATTTCTTGTGTTGTGTTGTTAATGGCTCAGATTGGAGCAGGCGATGAAGTAGGTTCAGTACTACTAGGAGGGAAGAAGTTAATAATTGGACTTCCTAAGAAATCAGGCTTCAGAGAATTTGTGGATTTACAACTCAATGATATTGATAAGACACAGGTCGTCAAGGCAACAGGCTATTCCATTGACGTCTTCAAGGCTGCAATAACTTTCCTTGAGAGCTCTCATTACAATGTTTCTTTGGAGTATAGAGCTTTTGTAGACGATGATGGAAACAGTGCTGGCAATTACGATGCACTCATCTATCAGATTTTTGAAAAGAAGTATGATGCTGTGGTGGGAGATCTGTCAGTTTTGGCAAATCGATCAAATTCAACATTAAGGAAACAGCTCAGTGGAGTTTCTATTTTGTGGCTTCCAGTAGAACAAGCAGTTCTTCCTGAAAGACAAGCATTGATCAAGAATTGCTCTAAGTTCGTGTTGGTGATGTGGCTGATAGTCGCATTTGTGCTAATGCAAAGTTACACAGCAAGCCTGTCATCGATATTGACAGTACATCAGTTACAACCTCTTTACCCTAATGAGCATGACATTGTGAAAGATCCTGACATTAATATTGGATATCACACTGAATCCTTCATCCGAGGTTTACTGGTCAACACCGTGAAGATTGATAAGTCGAGGGTGAAGAACTACCCTGACATTAAAGCATATAAGGACGCTTTGGACAAAGGTAGCCATAAAGGTGGAGTGGACGCTATTTTTGATCACATTTCCCACATTAAGATCTTTCTCAAACAATATGGTTCCGATGATTACGCCATGGTCGATACTAGACATCGCATTGATGGATTTGCTTTTGCCTTCCCCATTGGCTCCAACTTAACCTCGTACTTTTCAAGAGCCATATTAAATGTGAGAGAGAGTGAATACATGGGCAAGATAGAGGAAAAATATTTTGGAAGCAATCAAGAGGACAATGAAGGCCAAGGATCATGTACTACATCTTCATCATCATCATCATCAGACGATGCAAGTTCCAGTCTTACCACTTATAGCTTTGCAGGTTTGTTCATGGTGAATGGGATTCTTTCACTTTTAGCTTTTGCAGTTTCTGAAAGTCATATTTGGCGAAAACCTGTTGCGCTGGCAAAAACATATAGCCGAGAATGGCTGTTGAGTTGGAGTTTTAGAAGAACTAGTCCATTAGATGAAGGTTCTACAACAAGCAGACATGTTGATGGAGAAGATATTGCAACCAGAGAAAATAATCATAATATTGGTCTGGAAGTGGAGCATGTATAA	1347	0.3979	METPNYYFCYGYLVKISCVVLLMAQIGAGDEVGSVLLGGKKLIIGLPKKSGFREFVDLQLNDIDKTQVVKATGYSIDVFKAAITFLESSHYNVSLEYRAFVDDDGNSAGNYDALIYQIFEKKYDAVVGDLSVLANRSNSTLRKQLSGVSILWLPVEQAVLPERQALIKNCSKFVLVMWLIVAFVLMQSYTASLSSILTVHQLQPLYPNEHDIVKDPDINIGYHTESFIRGLLVNTVKIDKSRVKNYPDIKAYKDALDKGSHKGGVDAIFDHISHIKIFLKQYGSDDYAMVDTRHRIDGFAFAFPIGSNLTSYFSRAILNVRESEYMGKIEEKYFGSNQEDNEGQGSCTTSSSSSSSDDASSSLTTYSFAGLFMVNGILSLLAFAVSESHIWRKPVALAKTYSREWLLSWSFRRTSPLDEGSTTSRHVDGEDIATRENNHNIGLEVEHV	448

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi13g1091	448	PANTHER	IONOTROPIC GLUTAMATE RECEPTOR	39	138	-	-
	Mibi13g1091	448	SMART	GluR_14	41	336	IPR001320	GO:0015276\|GO:0016020
	Mibi13g1091	448	Pfam	Ligand-gated ion channel	141	376	IPR001320	GO:0015276\|GO:0016020
	Mibi13g1091	448	Gene3D	-	299	334	-	-
	Mibi13g1091	448	Gene3D	-	35	142	-	-
	Mibi13g1091	448	MobiDBLite	consensus disorder prediction	338	358	-	-
	Mibi13g1091	448	SUPERFAMILY	Periplasmic binding protein-like II	17	337	-	-
	Mibi13g1091	448	Gene3D	-	236	298	-	-
	Mibi13g1091	448	MobiDBLite	consensus disorder prediction	336	358	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi13g1091	Mibi-ChrMibi13	14062200	14066339	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi13g1091	171	381	Ion Channels	AT5G11210	36.493	5.59e-35	136