Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1090 ATGACAATCCCAAAGCACTATTATGGCTGCCTTCTAATAATTACTTGTCTTGCGTTGTTAACAGCTCCTATTGGAGCAGGCGATGATGAAGCTGCAGGTTCACTCCTAGGAGGTAAGAAGTTAATAATTGGACTTCCTAAGAAAGTAAACTGGGTTCAATTTATGGATTTACAACTCAATTCTAGAGATAAGAAGCAGGTCGTCAAGGCTACAGGCTATTCCATTGACGTCTTCGAAGCTGCAATAGCCTTCCTTAAGAGTTTAGGTTACAATATTTCTTTCGAGTATAGAGCTTTTGTAGACGATGATGGAAAAAGTGCTGGGGATAACGACGCACTCATCTATCAGATTTTTGAAGGAAAGTATGATGCTGTGGTGGGAGATGTGTCAATTGTGGCGAATCGCTCAAATTATGTAGATTTTACTTTGCCATATATGCCATCTGATGTGAAGATGCTCGTGAAGGTTCGTCATGATCCACGATTGAATATGTGGAATTTTATAAAGCCATTTAGTTGGGATCTATGGTTGTCCATAGTCATCTTCAATACTTTAATAGGAGGTGTCATATTGTTTATGGAGCGTGCTGTCGAGGAAAATTCCATAACTGAAAATTCACCACCCAGGAAACAGGTCATCAAGTTTTCTATGATTTTGTGGCTTCCTGTGATTCAAGCAGTTCTTCCAGAGAGAGAATCAGTGTCCAAAGCATGTTCTAGGTTTGTGTTGGTGTTATGGTTGATACTAGTATTTGTGCTCATGCAAAGTTACACAGCGTGCTTGTCATCGATCTTGACCGTACATCAGTTGCAGCCCAGTTACCCTAGTGAGAAACATGTTATAAACGATCCCAACATTTACATTGGATATCCTGGTACCTCATTCTTAGGAGGCATATTTGTTGGTCACATGAAGATTGATAGTTGGAGGATGAAGAAGTTCTACACTGTCAAACAGTATAAGGAGGCTTTGGACAAAGGAAGTCATAGAGGTGGTATCGATGCTTATTTTAATGAAGTTCCATACCTAAAGCTCTTCCTCAAGGAATATGGTTCTAATTATGCCTTGGTCAACACTAGGCACCGGAATGATGGATATGGTTTTGTGAACCAATCTAATGCACCATCAGACAATGCAAGTCCGAGCCTTACTGCTTATAGTTTTGCTGGTCTATTCATGGTCATTGGAATGCTATCACTCTTAGCTTTACTAGTTTCGGAGCGTCGTGTATGGATAAACTCTATTGTTGATCTGGTAAAAACGTGTAGCCAACAATTATTGAGGTTTTACAGATAG 1296 0.3989 MTIPKHYYGCLLIITCLALLTAPIGAGDDEAAGSLLGGKKLIIGLPKKVNWVQFMDLQLNSRDKKQVVKATGYSIDVFEAAIAFLKSLGYNISFEYRAFVDDDGKSAGDNDALIYQIFEGKYDAVVGDVSIVANRSNYVDFTLPYMPSDVKMLVKVRHDPRLNMWNFIKPFSWDLWLSIVIFNTLIGGVILFMERAVEENSITENSPPRKQVIKFSMILWLPVIQAVLPERESVSKACSRFVLVLWLILVFVLMQSYTACLSSILTVHQLQPSYPSEKHVINDPNIYIGYPGTSFLGGIFVGHMKIDSWRMKKFYTVKQYKEALDKGSHRGGIDAYFNEVPYLKLFLKEYGSNYALVNTRHRNDGYGFVNQSNAPSDNASPSLTAYSFAGLFMVIGMLSLLALLVSERRVWINSIVDLVKTCSQQLLRFYR 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1090 431 Pfam Ligand-gated ion channel 172 396 IPR001320 GO:0015276|GO:0016020
Mibi13g1090 431 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 38 373 - -
Mibi13g1090 431 Gene3D - 34 164 - -
Mibi13g1090 431 SUPERFAMILY Periplasmic binding protein-like II 13 374 - -
Mibi13g1090 431 Gene3D - 165 284 - -
Mibi13g1090 431 Pfam Ligated ion channel L-glutamate- and glycine-binding site 64 156 IPR019594 GO:0004970|GO:0016020
Mibi13g1090 431 SMART GluR_14 40 414 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1090 Mibi-ChrMibi13 14007595 14010029 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1090 38 375 Ion Channels AT2G24710 36.391 3.96e-60 209