Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1088 ATGACAATCCCAAAGTACTATCATGGCTGCCTTCTAATAATTAACTGTATTGCCTTGTTAACAGCTCAGATTGGAGCAGGCGATGAAGAAGTAGGTTCACTCTTAGGAGGGAAGAAGTTAGTAATTGGACTTCCTAAGAAATCAGGCTTCACCCAGTTTGTGGACTTACAACTCAATTCAACTAATAAGACTCAGGTCGTTAAGGCTACAGGCTACTGTATTGACGTCTTCGAAGCTGCAATAGCATATCTTGAGAGTTTAGGTTACAATATTTTGTACGAGTATAGAGCTTTTGCACATGAAGATGGAAGTGCTGGGGATTACAACGAACTCATCTATCAGATTTTTGAAGGAAAGTATGATGCGGTGGTGGGAGATGTGGCCATCGTGGCAAATCGATCAAATTATGTGGATTTCACTTTACCATATGCGCCGTCTGATGTAGAGATGCTCGTGAAGGTTCGTCGTGATCCAAGATTGAATATGTGGATTTTCGTAGAGCCTTTCAGTTGGGATCTGTGGCTATCCACAATCATATTCAGTATTTTAATAGGAGGAATTATATTGTTCATGGAACGTGCTAATGATAAAGAGGAAGATCCAGCACTTGAAATGTCACCATCTAGGAAACAACTCAGCAAGTTTTCTATCCTCTGGTTTCCTGTTATGCAAGCAGTTCTTCCTGAAAGAGAATCAGTGTCCAAAGCATGCTCTAGATTTGTGTTGGTATTATGGTTGATACTAGCATGTGTGCTCATGCAAAGTTACACAGCAAACTTATCATCGATCTTGACCGTACATCAGTTGAAACCAACTTATCCTAATGAGAAAGATGTTTTGAGTGATCCCAATATTAATATTGGATATCCTGGCGTCTCATTCTTAAGAGGCTTATTTGTTGATGACTTGAAGATTGATAGTTGGAGGTTGAAGAACTATTCCACTGTTAAAGAGTATAAGGACGCTTTGAACAAAGGAAGCCGTAAAGGTGGTGTTGATGCTATTTTTGATGAAGTTTCATATCTTAAGATCTTCCTTAAGCAACATGGTTCTGATAATTATGCCTTGGTCAAAACTAGGCACCGCAATGATGGATTTGGTTTTGCATTCACAAGAGGCTCCAACTTAACCTCGTACTTTTCTAGGGCCATACTAAATGTGAGTGAGAGTGAAGAAATGGATCGAATTGAGGAGAAATATTTTGGAAGCAACGATATTGATGAAAGTCAAGATCTTTCAAATGGATCATCAGACAATAATACAAGTGCTAGCCTTACCGCTTATAGTTTTGCAGGTCTATTCATGGTGATTGGAGTATTTTCACTCTTAGCTTTGCTAGTTTCTGAAAGTCGTGTTTGGCGAAAACACATTAAACTAGCAAAAACTTATAGCCAACAATTCTTGAGTCAGAGTTTTAGAAAAACTAAATCCATAATTCAAAGGTTCTAA 1449 0.3851 MTIPKYYHGCLLIINCIALLTAQIGAGDEEVGSLLGGKKLVIGLPKKSGFTQFVDLQLNSTNKTQVVKATGYCIDVFEAAIAYLESLGYNILYEYRAFAHEDGSAGDYNELIYQIFEGKYDAVVGDVAIVANRSNYVDFTLPYAPSDVEMLVKVRRDPRLNMWIFVEPFSWDLWLSTIIFSILIGGIILFMERANDKEEDPALEMSPSRKQLSKFSILWFPVMQAVLPERESVSKACSRFVLVLWLILACVLMQSYTANLSSILTVHQLKPTYPNEKDVLSDPNINIGYPGVSFLRGLFVDDLKIDSWRLKNYSTVKEYKDALNKGSRKGGVDAIFDEVSYLKIFLKQHGSDNYALVKTRHRNDGFGFAFTRGSNLTSYFSRAILNVSESEEMDRIEEKYFGSNDIDESQDLSNGSSDNNTSASLTAYSFAGLFMVIGVFSLLALLVSESRVWRKHIKLAKTYSQQFLSQSFRKTKSIIQRF 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1088 482 Gene3D - 312 366 - -
Mibi13g1088 482 Gene3D - 367 401 - -
Mibi13g1088 482 SUPERFAMILY Periplasmic binding protein-like II 12 403 - -
Mibi13g1088 482 Gene3D - 163 289 - -
Mibi13g1088 482 Gene3D - 33 162 - -
Mibi13g1088 482 SMART GluR_14 39 403 IPR001320 GO:0015276|GO:0016020
Mibi13g1088 482 FunFam Glutamate receptor 36 159 - -
Mibi13g1088 482 Pfam Ligand-gated ion channel 403 438 IPR001320 GO:0015276|GO:0016020
Mibi13g1088 482 Pfam Bacterial extracellular solute-binding proteins, family 3 86 402 IPR001638 -
Mibi13g1088 482 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 37 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1088 Mibi-ChrMibi13 13951370 13956032 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1088 37 447 Ion Channels AT2G29120 40.241 3.90e-80 266