Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1085 ATGAGCACGTCAAGCCAGAAGAAAAAGAAAAGCTTTACCCTTTGCCTCTGGTTTCGTTGCTTTTGTACTTTGCTATGTTTCTTTGTGGAACCTTCAAAGGCTAAGGAGTTACAAATTCCAATAGGGATAGTTGTTGATCTCAACTCTTCAATTGGAAGTATGGCCATTCGCTGCATCCAAATGGCTCATCAAGATTTTTATAAGAACTTTTCTCATTACCAAACAAGACTTGATCTTCGAATCAAGGATTCCGAGAAAGATGTCGTCATGGCAGCATCAGCAGCTTTCGATTTGATGAAGAATGAAAAGGTGCATGCAATTATGGGACCTTTATTTTCAGAACAAGCAAGATTCATAATACAACTTGGGCACAAACTTCACGTGCCTATAGTCTCATTTTCAGCCACAAGTCCATCTCTTCCTCCAATCCAAAGCAAATATTTCATAAGGACAGCACAAGATGATCGCTCACAGGCGCAAGCTATAGCAGCCATTGTTGAAGCTTATGGGTGGCACGAAATTATCCCAATCTATGAAGACACAGAGTATGGCAATGGTCTAATCCCATATCTCACAGACGCATTGCACAAAGTTAACACACGAATGCCTTATAGAAGTGCTATTGATCCAAATTCTGATGAATCTGAAATCTTAGAGGAGCTAAAGAAGCTGAATCAAAGTAGAAAAAGAATATTTATTGTTCATATGACAAGTCTTCTTGGGCCCAAATTCTTCTTAGCAGTGAACAAGGCGGGAATGATGAGGGGGTATGGGTGGATAGTCACAGATGGGCTATCTAATGTGTTAGATCCTAATTTGGGGCCAAAAGTAATGGATTCTATGCAAGGTGTCTTGGGGGTAAGGCCGAAAGTGGAAAAGTCTAAAAGGCTTACAAGTTTCAGAAACAAATGGAGAGCTATGTCAATTAAACAAGGTAGTGTGTCTTCTTCCTTAACCTTGTTTGGACTTTGGGCTTATGACACAGTTTGGGCAATTGCCATGGCAGTAGAGTCTACTTTTGAAAATTCCAAGGGGAATGACACATCACTACTTGTACATAGAATTCTAAATACTAAATTCCAAGGCCTCTCTGGGAATTTCAATTTGAATGAGGGACAAGTCAAACCCTTAGAGCTTGAGGTATTCAATGTGGTAGGACGTAAAGAGAGGGTCATTGGACATTGGAGCCTACGGAAAGGACTATTCTATGAGAATCATTGGAGTTCAAGAGAGAAACTAAAGCCACCAATATGGCCAGGGGACACAATAAATCAACCAACCAAGTTGAAAATTGGGGTCCCTATAAGGAAGGGTTTTGTTGAATTTTTGAAGGTGGAAAGATTGTCTTCAAATAGTACTCAACATGTTTCTGGCTTTACTATTGATGTGTTTGAAGAAGTGGTCAAAGCTTTACCTTTTCATCTTCCATACGACTTTTTCCCATTCCAGTTTGATGTTGGAGAAAGCACCGGGTCCTCGCATGAGCTTTTTAAGGAGTATGATGCTGTGGTTGGGGACATAACTATTGTAGCTAGCCGTGCCGAACATTTTGACTTTACGTTGCCGTTTTCAGAATCAGGAGTGTCAATGATAGTTTTGATGAAGCAAGATGAGAGACCAAACATGTGGATATTCTTAAAGCCTTTGAGTCCAAGCCTTTGGCTCACCACATGTGCAGCTTTCATCCTCACAGGTATCATTATATGGCTTCACGAACGTCATACAAACACAGAATTTCAAGGATCCCCACAGCAACAACTTGGCATGATGTTCTGGTTCTCTTTCTCCACCTTAGTCTTTGCTCACAAGGAAAGATTAGTGAACAACTGGTCGCGTTTTGTGCTGATATTGTGGGTATTTGTGGTGCTCATCATAACACAAAGTTACACAGCAAGTTTAGCTTCCATGTTAACTGTACAAAGATTGCAGCCTAAGTTCATGAACGTGAAAGAGATAAGAGAGAATAATTACTGTGTGGGATATCAGAAAGGATCCTTCGTCAAAATGCTTCTGGAAAATCAATTGGGATTCAAGGATGAGTCGAAGTTGAAGCCATACGAGACGCCTGAACAATATGATCAAGCTCTCTCCAGTGATGAGGTTGCAGCTGTATTAGATGAAATCCCCTACTTGAAGCTCTTCCTCTCAAAATATAGCACCAACTCCAAGTATGCCATGGTGGGGCCAATCTACAAAGCTGGTGGTTTCGGCTTTGTGAGTTCTCTCTCTCTTGTTCCATCTTACCTGGGTTTATCCTATGTTTAG 2265 0.4088 MSTSSQKKKKSFTLCLWFRCFCTLLCFFVEPSKAKELQIPIGIVVDLNSSIGSMAIRCIQMAHQDFYKNFSHYQTRLDLRIKDSEKDVVMAASAAFDLMKNEKVHAIMGPLFSEQARFIIQLGHKLHVPIVSFSATSPSLPPIQSKYFIRTAQDDRSQAQAIAAIVEAYGWHEIIPIYEDTEYGNGLIPYLTDALHKVNTRMPYRSAIDPNSDESEILEELKKLNQSRKRIFIVHMTSLLGPKFFLAVNKAGMMRGYGWIVTDGLSNVLDPNLGPKVMDSMQGVLGVRPKVEKSKRLTSFRNKWRAMSIKQGSVSSSLTLFGLWAYDTVWAIAMAVESTFENSKGNDTSLLVHRILNTKFQGLSGNFNLNEGQVKPLELEVFNVVGRKERVIGHWSLRKGLFYENHWSSREKLKPPIWPGDTINQPTKLKIGVPIRKGFVEFLKVERLSSNSTQHVSGFTIDVFEEVVKALPFHLPYDFFPFQFDVGESTGSSHELFKEYDAVVGDITIVASRAEHFDFTLPFSESGVSMIVLMKQDERPNMWIFLKPLSPSLWLTTCAAFILTGIIIWLHERHTNTEFQGSPQQQLGMMFWFSFSTLVFAHKERLVNNWSRFVLILWVFVVLIITQSYTASLASMLTVQRLQPKFMNVKEIRENNYCVGYQKGSFVKMLLENQLGFKDESKLKPYETPEQYDQALSSDEVAAVLDEIPYLKLFLSKYSTNSKYAMVGPIYKAGGFGFVSSLSLVPSYLGLSYV 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1085 754 FunFam Glutamate receptor 154 311 - -
Mibi13g1085 754 FunFam Glutamate receptor 542 672 - -
Mibi13g1085 754 Pfam Bacterial extracellular solute-binding proteins, family 3 453 739 IPR001638 -
Mibi13g1085 754 CDD GluR_Plant 428 739 - -
Mibi13g1085 754 SUPERFAMILY Periplasmic binding protein-like I 39 396 IPR028082 -
Mibi13g1085 754 SUPERFAMILY Periplasmic binding protein-like II 421 739 - -
Mibi13g1085 754 PIRSF IGluLR_plant 8 742 IPR017103 -
Mibi13g1085 754 SMART GluR_14 428 753 IPR001320 GO:0015276|GO:0016020
Mibi13g1085 754 Pfam Ligand-gated ion channel 552 664 IPR001320 GO:0015276|GO:0016020
Mibi13g1085 754 Gene3D - 541 682 - -
Mibi13g1085 754 Gene3D - 65 160 - -
Mibi13g1085 754 Gene3D - 424 540 - -
Mibi13g1085 754 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 41 739 - -
Mibi13g1085 754 Pfam Receptor family ligand binding region 59 385 IPR001828 -
Mibi13g1085 754 Gene3D - 161 322 - -
Mibi13g1085 754 CDD PBP1_GABAb_receptor_plant 41 402 IPR044440 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1085 Mibi-ChrMibi13 13931697 13934650 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1085 21 739 Ion Channels AT2G29120 41.711 0.0 586