Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1080 ATGGAATCCCAGAAACGGAAATTCGTCAGGTTCTTCTCGGACGGCAAAAATCATAAGGAAGAGGAACCATTGTGGCGAGGAAATGGACTATCACCACTGGAAAAGCCATCATCTACATACAGTGTTTCGATGGCTTCCTCGCTAAAGCAAGACAATGCACCAACGTGGGGGAAGAATAGATTGGTTGAGACATTTAAGGTAGGGGGATCTAAGGTGTTTCCTGAGGAACCTGAGCCATGGCGCAGAAGGATATTGGATCCATCTAGTGAGATTGTGTTGAAATGGAACCGAGTCTTCATTGTTTCTTGCTTGATGGCTCTTTTTGTAGATCCATTGTATCTTTACTTGCCCAGCGTGAGAAGATATGAAAATTCTTCATGTGTGAGGACAGACCTGAACTTACGGATTGCTGTGACCTTACTGCGGACTGTCACAGACTTTTTTTATCTGTTGCACTTGATAATTAAGTTCCGGACGGCGTATGTGGCCCCTAGTTCACGGGTATTTGGTCGGGGAGAACTTGTCACGGACCCAAAGAAGATTGCAAGAAGATATATCAGATCAGATTTCTTCATTGATTTTGTTGCTACTCTGCCTCTTCCCCAAATACTCATTTGGTTTATCATACCAGCAACAAGAAGCCCTCTTGCTGATCAGAATAATAATGCTCTGGCATTGATTGTTCTGCTTCAATATGTTCCAAGATTATATTTGATCTTTCCACTAAGTTCTGAAATAATTAAAGCAACTGGAGTGGTTACAAAGACTGCATGGGCAGGTGCTGCATATAATCTGCTGTTGTATATGCTGGCCAGTCATATTTCAGGGGCTGCGTGGTATCTTCTATCACTGGACCGTTATACCTATTGTTGGAAATCTTTTTGCAGAAAGGATTCTAGTCCTGATTGCTTTCTTTATCTGGACTGTGATTCTCTCAACAAGGAGCAACGCAAAGTATGGGCAAATGTTACAAGTGTGTTTAAAAACTGCGATCCCAGTACAGAACATTTTGCTTTTGGGATATTCGAATCTGCAGTGCTAAAACATGTTGTCTCCACAAACTTCATCTCAAAGTACTTCTATTGTTTATGGTGGGGTTTGCAGCAACTTAGTTCTTATGGGCAGAACTTGGCGACTAGCACTTTTATGGGCGAGACATCATTTTCTATTCTGATTGCTATCCTGGGTCTTGTGTTGTTTTCACATTTGATTGGGAACATGCAGACATATTTGCAATCAACCACCATTAGGTTTGAGGAGTGGAGGCTCAAGCGAAGAGACACTGAAGAGTGGATGAGACATCGTCAACTCCCTGAAGATTTGAAACGGCGTGTTCGACGTTTTGTTCAGTGCAAGTGGCTTGCAACCCGAGGAGTTGATGAAGAAACAATTTTACGTGCATTACCTGCTGATCTTCGCCGTGATATCCAACGCCACTTATTCTTAGACCTTGTTCGACGAGTTCCCTTCTTCTCACAGATGGATGATCAACTACTAGACGCAATATGTGAGCGGCTGGAATCCTTTTTGAGCACCCAAGGCACCTACATCGTTCGAGAGGGGGACCCTGTGACAGAAATGCTCTTCATTGTCAGAGGTAGACTAGACAGTTCCACTACAAACGGCGGTCGGAGTGGTTTCTTCAATTCAATCATATTGAGACCTGGAGATTTTTGTGGTGAGGAGCTACTTGCGTGGGCCTTACTTCCAAAGTCGACTGTGAACCTGCCTACTTCAACCAGGACTCTTAAATCTCTTACCGAGGTTGAAGCTTTTGCTCTTCGAGCTGAAGACCTCAAGTTTGTGGCAAATCAATTCAGGCGCCTCCACAGCAAGAAGCTGCAGCACACCTTCCGGTTTTATTCTCATCATTGGAGGACTTGGGCAGCCTGCTTCATACAGGCTGCGTGGCATCGGTATAAGAAACGGATGTCCGCCAAAGATCTCGCATTTAGGGAATCCTTCAATATGGATGAAAATGTGGCCAATGAGAGAGAATATGGGGATGAAAGTCCTGCTTATTCAAATTCTTCTCAAGCTAAATTAAACCTTGGGGTCACATTACTTGCCTCAAGGTTTGCTGCAAACACAAGAAGGGGAGCTCTCAAAATTAAAGATGACCTGCCAAAACTACAAAAGCCAGAAGAACCTGACTTCACTGTTGAAGCTGATGATGACTAG 2181 0.4379 MESQKRKFVRFFSDGKNHKEEEPLWRGNGLSPLEKPSSTYSVSMASSLKQDNAPTWGKNRLVETFKVGGSKVFPEEPEPWRRRILDPSSEIVLKWNRVFIVSCLMALFVDPLYLYLPSVRRYENSSCVRTDLNLRIAVTLLRTVTDFFYLLHLIIKFRTAYVAPSSRVFGRGELVTDPKKIARRYIRSDFFIDFVATLPLPQILIWFIIPATRSPLADQNNNALALIVLLQYVPRLYLIFPLSSEIIKATGVVTKTAWAGAAYNLLLYMLASHISGAAWYLLSLDRYTYCWKSFCRKDSSPDCFLYLDCDSLNKEQRKVWANVTSVFKNCDPSTEHFAFGIFESAVLKHVVSTNFISKYFYCLWWGLQQLSSYGQNLATSTFMGETSFSILIAILGLVLFSHLIGNMQTYLQSTTIRFEEWRLKRRDTEEWMRHRQLPEDLKRRVRRFVQCKWLATRGVDEETILRALPADLRRDIQRHLFLDLVRRVPFFSQMDDQLLDAICERLESFLSTQGTYIVREGDPVTEMLFIVRGRLDSSTTNGGRSGFFNSIILRPGDFCGEELLAWALLPKSTVNLPTSTRTLKSLTEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWHRYKKRMSAKDLAFRESFNMDENVANEREYGDESPAYSNSSQAKLNLGVTLLASRFAANTRRGALKIKDDLPKLQKPEEPDFTVEADDD 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1080 726 MobiDBLite consensus disorder prediction 706 726 - -
Mibi13g1080 726 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 76 719 - -
Mibi13g1080 726 SUPERFAMILY cAMP-binding domain-like 419 612 IPR018490 -
Mibi13g1080 726 SMART cnmp_10 490 621 IPR000595 -
Mibi13g1080 726 CDD CAP_ED 490 621 IPR000595 -
Mibi13g1080 726 Pfam Cyclic nucleotide-binding domain 513 601 IPR000595 -
Mibi13g1080 726 PRINTS EAG/ELK/ERG potassium channel family signature 453 460 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi13g1080 726 PRINTS EAG/ELK/ERG potassium channel family signature 270 280 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi13g1080 726 PRINTS EAG/ELK/ERG potassium channel family signature 153 162 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi13g1080 726 PRINTS EAG/ELK/ERG potassium channel family signature 385 396 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi13g1080 726 PRINTS EAG/ELK/ERG potassium channel family signature 359 376 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi13g1080 726 PRINTS EAG/ELK/ERG potassium channel family signature 403 412 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi13g1080 726 FunFam Cyclic nucleotide-gated ion channel 1 488 606 - -
Mibi13g1080 726 SUPERFAMILY Voltage-gated potassium channels 86 412 - -
Mibi13g1080 726 ProSiteProfiles cAMP/cGMP binding motif profile. 490 573 IPR000595 -
Mibi13g1080 726 Pfam Ion transport protein 95 415 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mibi13g1080 726 Gene3D - 98 414 - -
Mibi13g1080 726 Gene3D Jelly Rolls 488 608 IPR014710 -
Mibi13g1080 726 Gene3D Helix hairpin bin 418 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1080 Mibi-ChrMibi13 13842467 13846955 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1080 1 725 Ion Channels AT4G30360 66.166 0.0 969