Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1078 ATGCCTCCTCCTCTGAATCCTCCAATTCATCATGAACAACCCCAACAACCAAAACCCAGTCCCAAACTCCTCTCAATCCTCCTGAAAGTCCTCATCATGACCCTCCTCACTTCCATCTTCTTCATCTTCCTGGGTTTCGCCGCCTTCGTCCTCCTCAATTTCTGCTTCATCGGCGGAATCTACCACCGCCTCTGTTCTCGCTCCTCCACCGCCCATCTGGGCCCCACTCCCAATATTGGAGGAGGAATCGCGCCTCGTGACATAAAAAAGCTTCCCCATTTCCGTGTTTCTTCTTGTGGGCCCCAATTAGGACCAGAATCCCAATGTGTTGTTTGCTTGGATGGCTTTAGGAATGGTCATTGGTGTAGGAAGCTTGCTGGTTGTGGCCATGTTTTTCACAGGAGATGTGTTGATGCTTGGCTTGTGAAGGTGGCTTCTTGTCCCACTTGCAGGACACCTGTTCGATCGAATGCCGAAGTGGATTCAGGTGAGGCTTTAGATGTTAATGGTGGGAGGAGGAGGAGGGTGTGTGATTTTGAACATCATCCAGTTAGGACTGTGGTTTCAGTTGAATGA 576 0.5 MPPPLNPPIHHEQPQQPKPSPKLLSILLKVLIMTLLTSIFFIFLGFAAFVLLNFCFIGGIYHRLCSRSSTAHLGPTPNIGGGIAPRDIKKLPHFRVSSCGPQLGPESQCVVCLDGFRNGHWCRKLAGCGHVFHRRCVDAWLVKVASCPTCRTPVRSNAEVDSGEALDVNGGRRRRVCDFEHHPVRTVVSVE 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1078 191 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 12 161 - -
Mibi13g1078 191 SMART ring_2 109 150 IPR001841 -
Mibi13g1078 191 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 80 157 IPR013083 -
Mibi13g1078 191 ProSiteProfiles Zinc finger RING-type profile. 109 151 IPR001841 -
Mibi13g1078 191 SUPERFAMILY RING/U-box 102 156 - -
Mibi13g1078 191 Pfam Ring finger domain 108 151 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1078 1 178 C3H Transcription Factor Family AT2G18670 37.297 1.81e-30 108