Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1057 ATGGGGAAACACAACAATAACTCAAACAAGAACAGTACCCCTAAGGCAGCTAATAACAGTACCAGTGTGACATCTACAACCACCACCAAGAAACGAACCAGAAGAAGTGTCCCCAGAGATATACCTCTTCAACGTAGCTCCAAATATAGAGGAGTCACAAGGCACCGATGGACAGGAAGATATGAAGCTCATCTGTGGGACAAGAATTGTTGGAATGAATCACAGAACAAGAAAGGACGACAAGGTGCTTATGATGATGAAGAGGCTGCAGCACATGCTTATGATCTCGCAGCTTTAAAATACTGGGGTCCAGATACCATTCTCAACTTTCCGTTATCGACCTATCTCAACGAAATGAAAGAAATGGAGGGTCAATCAAGGGAAGAATATATTGGATCATTAAGAAGGAAAAGCAGCGGTTTTTCTCGGGGAGTTTCTAAATACAGAGGCGTGGCAAGACATCATCATAATGGAAGATGGGAGGCTCGCATTGGTAGAGTTTTTGGCAACAAATATCTTTATCTTGGGACTTATGCCACCCAAGAAGAAGCAGCCACAGCATATGATATGGCAGCTATTGAATATCGTGGCCTTAATGCTGTCACCAATTTTGACCTAAGTCGTTACATTAAGTGGCTTAAGCCCAAAATTAATGACGGCGTCAACATGATTAATAACAGTACTAGTAATAATAGTATTAGTACCGTGCTTAGTGACTCTAATAACAACAACAACCCTAATTACTCTGATACTAACTTCACTACTAGTACTACCACATCACCAAACCCTAATAGTAGTTATCAAGAACATGGTTTCAATAATTTCTTCACCAACCACCATCACCATCAGGATTCTTCATTCAGTAGTAGTGGGGATGAAACCACCGCTAGTGCCAGTGCCGCCACCGTGAGTTTTGCTCAGTCACGGCAGGTGAATGCCACGTCAGCCCTAGGGCTGCTGCTTCAGTCATCAAAGTTCAAGGAGATGACGGAGATGACGTCGGTGGCTGATTTGTCGCCGATGAAGCCGGAGGAGTCTCAGTTGCCGGCGCCTGCATGTAGGTTTCCAGAGGATATTCAGACGTATTTTGAGTGTGAAGGGGATTATAATACAGTGTTTAGTGAGCTTAATAATTATTCTTTTGTGTCTTCTTCTATGTTCAACTATCATGATGACTTTGAGACATGA 1188 0.4276 MGKHNNNSNKNSTPKAANNSTSVTSTTTTKKRTRRSVPRDIPLQRSSKYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQGAYDDEEAAAHAYDLAALKYWGPDTILNFPLSTYLNEMKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLKPKINDGVNMINNSTSNNSISTVLSDSNNNNNPNYSDTNFTTSTTTSPNPNSSYQEHGFNNFFTNHHHHQDSSFSSSGDETTASASAATVSFAQSRQVNATSALGLLLQSSKFKEMTEMTSVADLSPMKPEESQLPAPACRFPEDIQTYFECEGDYNTVFSELNNYSFVSSSMFNYHDDFET 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1057 395 Gene3D AP2/ERF domain 47 113 IPR036955 GO:0003700|GO:0006355
Mibi13g1057 395 Gene3D AP2/ERF domain 146 207 IPR036955 GO:0003700|GO:0006355
Mibi13g1057 395 SUPERFAMILY DNA-binding domain 146 207 IPR016177 GO:0003677
Mibi13g1057 395 CDD AP2 146 207 IPR001471 GO:0003700|GO:0006355
Mibi13g1057 395 SMART rav1_2 48 117 IPR001471 GO:0003700|GO:0006355
Mibi13g1057 395 SMART rav1_2 147 211 IPR001471 GO:0003700|GO:0006355
Mibi13g1057 395 MobiDBLite consensus disorder prediction 235 275 - -
Mibi13g1057 395 Pfam AP2 domain 146 197 IPR001471 GO:0003700|GO:0006355
Mibi13g1057 395 Pfam AP2 domain 47 103 IPR001471 GO:0003700|GO:0006355
Mibi13g1057 395 PRINTS Ethylene responsive element binding protein signature 187 207 IPR001471 GO:0003700|GO:0006355
Mibi13g1057 395 PRINTS Ethylene responsive element binding protein signature 49 60 IPR001471 GO:0003700|GO:0006355
Mibi13g1057 395 FunFam AP2-like ethylene-responsive transcription factor 47 113 - -
Mibi13g1057 395 ProSiteProfiles AP2/ERF domain profile. 147 205 IPR001471 GO:0003700|GO:0006355
Mibi13g1057 395 FunFam AP2-like ethylene-responsive transcription factor 146 207 - -
Mibi13g1057 395 MobiDBLite consensus disorder prediction 1 44 - -
Mibi13g1057 395 ProSiteProfiles AP2/ERF domain profile. 48 111 IPR001471 GO:0003700|GO:0006355
Mibi13g1057 395 SUPERFAMILY DNA-binding domain 47 113 IPR016177 GO:0003677
Mibi13g1057 395 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 12 285 - -
Mibi13g1057 395 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1057 Mibi-ChrMibi13 13504917 13507765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1057 5 209 AP2-EREBP Transcription Factor Family AT5G57390 61.538 9.84e-86 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mibi13g1057 AP2 8.1e-10 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g1243 09 28157479 28160194 Mibi13g1057 13 13504917 13507765 CCT