Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1054 ATGGCTAGAAAGAAGTCGACTGTGATCCGTGAGGATGATAATGTGCCCACTGCTTCTCAAGGCGGTGGAAAGTCGAAAAAGAAGGGTATTGTGATCGATGATGATGAGTATTCTATTGGGTCGGAGCTGTCTGAGGAGAAGCCTCCTGCCACGGGAAAGAAGAAATATAAAAAAGGTAACCCCAAGGCTTCAAAAGCAGAGGACGAAGATTTAGAAAAGGCGATGGATTATGATAATGATGATGACGTGCCTGAAGTTTTCTTTACTGGGAAGAAGAAGGGGAAATCAAAAAAGGTTGGTGGTAACTGTGTGTTTAAAGTTTCGAGCTTTGGTGTGCTTGGTGATGAGGCGGGTGGAGGAGAAGATGATGATGGAGACCAACAAAATGGCTTAACTGGTGGGGTGGACAATGACAAAGACGAGGAGTTGGTTGCTAGTTTCTTTGGTAAGAAGAAGTCATCAAAGGGTTCCAAGAAGAAGGGTAGTAGCTTGTTCACTGCATCAGCTTTTGATGCTATGAACGAAGATAATGAAGGGGAAGTGGTCGATAATTCTGTGGAAGCCAGCCGTGAGGAGAATGATGGCATGGATGAACTAGTTATTGCTTTTACGGGTAAGACAAAATCATCGATTAGTAGCAAGAAGGCTGCCTTATTCACAACATCTAGTTTTGGTGACACTGACTTAGAGCAGGACAAAAATGTACAAGAAGGTGAGGATGAAGATGTTGCTCCGATCACTTTCTCTTGGAAGAAAAAGAAAACATCGAAGTCTTCTAAGAAGGCTGTTAATTCATTTAGTGCAGCTTTTGCTGAAGAGGACGTGGATGATGATTCTGTGCTTGAGTCTATTAGAGTTGATGGAGATAATGCTGAGGACAAAGGTGCTTCTATTGTTGCCTTTTCTGGTAAAAAGAAATCTTCTAAGAAAAAGAGTGGAAGGGAAGATTTGGACAAGCTTCTTGCTGAGCTTGGGGTGGGGCCTCTAGTAAAACCTGCCTCCCCTCCAGTGGATGATGGTAAAGTTCAGTCTGCTTCTTCTGAAGTAGCTGCTTCTGCTACTGCTTTGGTGGAAAAAGAAGGGGAAGAAGAGACAATGGAGTCAGCTGCTGCAAAAAAGAAGAAGAAAAAAAAGGAAAAGGAGAAGAAGGCTGCTGCAAGTATCCCTGATGATGAAAGGAATGAAGAAGTTAAAACGGAGACCTCAGAATCAAAGAAGAATAATTCAAAGAGTAAAAGGGCTGAAAAGACAGTGCCAAAGCATGTTAGGGAGATGCAAGAGGCACTGGCTCGGAGAAAAGAGGCTGAAGAGAGGGAGAAAAGGGAAGAGGAGGAGAGGCTACGGAAGGAAGAAGAAGAGCGGCGTAGGCAAGAGGAGCTTGAGAGGCAAGCAGAAGAGGCAAGACGTAGGAAAAAGGAAAGGGACAAGGAGAAGCTCCAGAAGAAGAAACAAGAAGGGAAATTGTTAACTGGTAAGCAAAAGGAAGAAGCTCTTCGTTTGGAGGCCATGAGGAAGCAGTTTCTTGCTGGTACAGGGGCCATCACTCTTCCCACTGGGGACTCTGGTGCACCTCCCAAACGACCCATATATCAGACAAGGAAGTCAAAACAAACCCGCCATCATCAGAATGGTACTGCCCATGTTAAGGCAGCTGAAGATATGGAAGCAAAGGAAAATATGGAGACCATTCCTGCTGTAGAGTTATTGGAAGCTGAGAAGGTTGAAGTAGTTGAGTCAGTGCTGGATGAGGACAAAATTAAACCTTCTGAAGATATTGAAGAGGATGAATGGGATGCAAAGAGTTGGGATGATGTAAATTTTAATGGAAAAACTGCATTTGCTGATGAGGAGGCTGACTCTGAACCAGTACCTGCGGTGAAAAAGGAGATAAAAAAGGCTGCTCCCCCAGCCGTTGTAAAGTCAACAGGCACAACTAATAAGGCTGCTTCACAGCGGCCAACTGAGAAAATTGAAAGTAACAAGCAGGTTGAGAAGCAACCCCCTAAGCAGGATGGGTTGCTACCCTCAAATTCAGCCGTGCCATCTCAGCCAAGTGGAGGGAACCTTCGCTCCCCAATTTGCTGTATTATGGGCCATGTGGACGCAGGAAAAACTATGTTGCTGGATTGTATGAGAGGCACTAATGTTCAGGAAGGTGAGGCCGGTGGCATCACACAACAGATTGGTGCTACATGCTTTCCTGCGGAGAACATAAGTGAAAGAACAAAGGAACTGAAAGCTGATGCAAAGCTGAAAGTTCCAGGTCTGCTGGCCATAGATACTCCTGGGCATGAATCTTTTACTAACTTAAGGTCTAGGGGTTCTGGTCTCTGTGATATTGCAATTCTAGTCGTTGACATTATGCATGGATTAAAGCAACAGACAATAGAATCACTCAATCTATTGAAAATAAGGAATACGGAATTCATAGTTGCATTGAACAAAGTTGACAGACTCTATGGTTGGAAAGAATGCCACAATTCTCCAATTGTTAAGGCAATGAAACAGCAAACCAAGGATGTGCAAAATGAGTTCAAGATGAGAGTAGCTCAGATTATCACTCAATTCAAGGAACAGGGGTTAAACACTGAGTTGTACTATAAGAACAAAGAAATGGGAGAAACCTTCAGTATCGTACCCACTAGTGCTAGGAGTGGTGAAGGTATCCCGGATTTGTTATTGTTGTTGGTTCAATGGACACAAAAAACAATGGCTCAGAAAATCACATATAATGACGAAGTGCAGTGTACAGTTTTAGAGGTTAAGGTTGTTGAAGGTCAAGGGACAACTATTGATGTTGTCTTGGTTAATGGTGTTCTTCATGAAGGAGATCAAATAGTTGTGTGCGGAATGCAGGAGCCAATTGTTACTACCATTCGAGCTCTATTGACACCTCATCCTATGAAAGAGCTCCGTGTTAAGGGCACATATCTCCATCATAAAGAAATTAAGGCTGCCATGGGCATCAAAATCACTGCCCAGGGCCTTGAACATGTTATTGCTGGCACTGCTCTATATGTGGTGAAGCCAGAGGATGATGTAGATGGTGTAAAAGAATTAGCTAAGGATGAAATGAAGCACGTCATGAGCAGGATTGATAAGAGTGGTGAGGGAATTTGGGCACAGGCATCGACCCTTGGTTCTTTGGAAGCATTGCTGGAGCTTTTGAAAAAACCAGAAGTGAATATTCCTGTGAGAGGTATGAGCATAGGCCCTGTACATAAAAAAGATGTAGTGCAGGCCAGTGTAATGCTTGGAAAGAAAAGAAGGGAGTTTGCCACTATCTTGGCATTTGATGTCAAAGTCAATCAGGAGGCTAAAGATCTTGCGGAAGAACTTGGTGTGAAAATTTTTATGTCCGACACCATTTATCGCCTATTTGACCAATTTAAGGCCTATGTTGACAACATTAAGGAGGAAAAGAAGAGAGAAGCAGCTGCTGAGGCAGTCTTCCCATGTGTTCTGAAAATCTTACCAGGTCATGTTTTCAACAAGAAGGATCCAATTATTTTGGGAGTTGATATTCTTGAAGGTGTTTTAAAGGTTGGGACTCCAATTTGTATTCCTTCCAGAGATTACATTGATATTGGTCGCATTGCATCCATTGAAAATAACAACGAATCTCTTGATTATGCCAAGAAAGGACAGCGCGTAGCCATTAAGATTGTTGGCAGCAATGCCGAGGAACAACAAAAAATGTACGGGAGGCATTTTGCGATTGATGATGAACTTGTAAGCCATATCTCAAGGAGATCTATCGATATTCTCAAAGCTTGTTATAAGGATGAACTGAGCGTGGAGGAATGGGGGCTAGTCGAAAAATTGGAACAACTATTTCAGGATACGATGAGAAGGCACTCTGGAGTATCATTTTATTAG 3879 0.4305 MARKKSTVIREDDNVPTASQGGGKSKKKGIVIDDDEYSIGSELSEEKPPATGKKKYKKGNPKASKAEDEDLEKAMDYDNDDDVPEVFFTGKKKGKSKKVGGNCVFKVSSFGVLGDEAGGGEDDDGDQQNGLTGGVDNDKDEELVASFFGKKKSSKGSKKKGSSLFTASAFDAMNEDNEGEVVDNSVEASREENDGMDELVIAFTGKTKSSISSKKAALFTTSSFGDTDLEQDKNVQEGEDEDVAPITFSWKKKKTSKSSKKAVNSFSAAFAEEDVDDDSVLESIRVDGDNAEDKGASIVAFSGKKKSSKKKSGREDLDKLLAELGVGPLVKPASPPVDDGKVQSASSEVAASATALVEKEGEEETMESAAAKKKKKKKEKEKKAAASIPDDERNEEVKTETSESKKNNSKSKRAEKTVPKHVREMQEALARRKEAEEREKREEEERLRKEEEERRRQEELERQAEEARRRKKERDKEKLQKKKQEGKLLTGKQKEEALRLEAMRKQFLAGTGAITLPTGDSGAPPKRPIYQTRKSKQTRHHQNGTAHVKAAEDMEAKENMETIPAVELLEAEKVEVVESVLDEDKIKPSEDIEEDEWDAKSWDDVNFNGKTAFADEEADSEPVPAVKKEIKKAAPPAVVKSTGTTNKAASQRPTEKIESNKQVEKQPPKQDGLLPSNSAVPSQPSGGNLRSPICCIMGHVDAGKTMLLDCMRGTNVQEGEAGGITQQIGATCFPAENISERTKELKADAKLKVPGLLAIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLKQQTIESLNLLKIRNTEFIVALNKVDRLYGWKECHNSPIVKAMKQQTKDVQNEFKMRVAQIITQFKEQGLNTELYYKNKEMGETFSIVPTSARSGEGIPDLLLLLVQWTQKTMAQKITYNDEVQCTVLEVKVVEGQGTTIDVVLVNGVLHEGDQIVVCGMQEPIVTTIRALLTPHPMKELRVKGTYLHHKEIKAAMGIKITAQGLEHVIAGTALYVVKPEDDVDGVKELAKDEMKHVMSRIDKSGEGIWAQASTLGSLEALLELLKKPEVNIPVRGMSIGPVHKKDVVQASVMLGKKRREFATILAFDVKVNQEAKDLAEELGVKIFMSDTIYRLFDQFKAYVDNIKEEKKREAAAEAVFPCVLKILPGHVFNKKDPIILGVDILEGVLKVGTPICIPSRDYIDIGRIASIENNNESLDYAKKGQRVAIKIVGSNAEEQQKMYGRHFAIDDELVSHISRRSIDILKACYKDELSVEEWGLVEKLEQLFQDTMRRHSGVSFY 1292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1054 1292 Pfam Elongation factor Tu GTP binding domain 693 901 IPR000795 GO:0003924|GO:0005525
Mibi13g1054 1292 Gene3D Translation factors 912 1032 - -
Mibi13g1054 1292 PRINTS GTP-binding elongation factor signature 693 706 IPR000795 GO:0003924|GO:0005525
Mibi13g1054 1292 PRINTS GTP-binding elongation factor signature 773 784 IPR000795 GO:0003924|GO:0005525
Mibi13g1054 1292 PRINTS GTP-binding elongation factor signature 809 818 IPR000795 GO:0003924|GO:0005525
Mibi13g1054 1292 PRINTS GTP-binding elongation factor signature 757 767 IPR000795 GO:0003924|GO:0005525
Mibi13g1054 1292 Gene3D - 1033 1138 IPR036925 -
Mibi13g1054 1292 Coils Coil 359 383 - -
Mibi13g1054 1292 FunFam Eukaryotic translation initiation factor 5B 683 911 - -
Mibi13g1054 1292 MobiDBLite consensus disorder prediction 671 686 - -
Mibi13g1054 1292 MobiDBLite consensus disorder prediction 639 656 - -
Mibi13g1054 1292 MobiDBLite consensus disorder prediction 357 374 - -
Mibi13g1054 1292 Gene3D Translation factors 1146 1280 - -
Mibi13g1054 1292 MobiDBLite consensus disorder prediction 1 83 - -
Mibi13g1054 1292 Gene3D - 685 911 IPR027417 -
Mibi13g1054 1292 SUPERFAMILY Translation proteins 1149 1279 IPR009000 -
Mibi13g1054 1292 Coils Coil 418 489 - -
Mibi13g1054 1292 Pfam Elongation factor Tu domain 2 928 1006 IPR004161 GO:0005525
Mibi13g1054 1292 CDD IF2_eIF5B 692 902 - -
Mibi13g1054 1292 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 689 907 IPR000795 GO:0003924|GO:0005525
Mibi13g1054 1292 CDD aeIF5B_II 913 1023 - -
Mibi13g1054 1292 MobiDBLite consensus disorder prediction 629 686 - -
Mibi13g1054 1292 MobiDBLite consensus disorder prediction 382 497 - -
Mibi13g1054 1292 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 1015 1144 IPR036925 -
Mibi13g1054 1292 MobiDBLite consensus disorder prediction 115 138 - -
Mibi13g1054 1292 MobiDBLite consensus disorder prediction 511 555 - -
Mibi13g1054 1292 FunFam Eukaryotic translation initiation factor 5B 1145 1281 - -
Mibi13g1054 1292 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 690 980 IPR027417 -
Mibi13g1054 1292 CDD IF2_aeIF5B_IV 1153 1248 - -
Mibi13g1054 1292 FunFam eukaryotic translation initiation factor 5B 912 1031 - -
Mibi13g1054 1292 Pfam Translation-initiation factor 2 1019 1131 IPR023115 -
Mibi13g1054 1292 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 319 1274 IPR015760 -
Mibi13g1054 1292 FunFam Eukaryotic translation initiation factor 5B 1031 1138 - -
Mibi13g1054 1292 TIGRFAM small_GTP: small GTP-binding protein domain 694 820 IPR005225 GO:0005525
Mibi13g1054 1292 MobiDBLite consensus disorder prediction 324 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1054 Mibi-ChrMibi13 13475470 13482595 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1054 315 1280 Eukaryotic Initiation Factors Gene Family AT1G76810 64.036 0.0 1068