Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1049 ATGAATAGCCCCACTTGTAAGGCATACATGGCAAAACCTAGTAAGTTGCTAGTTGCTTTTTTGGCTCAGATTTTAGCTATAGTAGCCGCCATTTCGGGGAATACAGTGTTTGCTTTGGGTACATCTTCTTCCTCGGACCTGTTTGTTCTGCAACAACTGGACAGGGTTGATAGGTTGCCAGGTCAAACTTTTAAGATAGACTTCAAACATTATGCTGGGTATGTCACAGTCAACCAGGAATCTGGGAGAGCACTGTTTTACTGGTTCTTTGAAGCTGCTTCTGACCCTGAAAACAAGCCTATTGTTCTTTGGCTCAATGGAGGACCTGGATGTTCATCCATTGCTTACGGGGAAGCAGACGAAATTGGTCCCTTTCACATTCGGCCAGATGGCAAGACCCTTTATCTAAATCCTTACTCTTGGAATCAAGTTGCCAATGTTCTTTTTCTTGATTCCCCTGTTGGAGTTGGATTTTCGTATTCAAACACTTCATCTGACATACTGAACAATGGTGATAAGAGGACTGCTGAGGACTCTTTGGAATTTCTGTTGAAGTGGTTAGAGCGGTTTCCTCAGTATAAAGGAAGAGATTTCTATATCTCTGGTGAAAGCTATGCAGGGCATTATGTTCCTCAACTTAGCCAAGCTATTGTGAATTACAATAAGAATGCCAAAGAAAAAACGATCAATCTGAAAGGCTATATGGTTGGAAATGCTCTAACTGATGATTACAATGATCGCAAGGGAGTTGCCCAGTTTTTGTGGTCATCCGGTTTGATTTCTGATCAAACATATCAGCAAATGAACCTTCAATGTGGCAATGAGTCTTTCATATATCCTCCAGATTCATGTGTAAAAATTTTAGAGAATGCTGACATAGAAGTTGGCCAAATTGATAAGTACAGTATCTTCACTCCTACATGCACTGCTAATTCTAGTCAGACAAACCAGCTGGTGAAACGGAGGCATAGAATTGGCAGACTTAGAGGGGTGTATGATCCTTGCACCTGGGAGCACTCCACTATATACTTCAATCTACCTGAGGTCCAGGAGGCTCTTCATGTTGATCCAGCTCACAAGCCTGCTAAATGGGACACCTGCAGTGAAGAGGTACATGGAAACTGGAAGGACTCTCCATTGACAGTGCTTGATGTGTATCGTGAACTTATTCCAACAGGACTAAGGATATGGGTGTTCAGTGGTGACACAGATGGTATGATCCCAGTGACATCCACTCGATACAGCATAGATGCTCTGAAGCTTAAAACTGTGAGCCCTTGGCGTCCTTGGTACGATGATGGGCAGGTGGGAGGATGGACACAAGAATATGAAGGACTGACTTTTGTAGCAGTAAGAGGGGCAGGGCATGAAGTTCCCCTGCACAGACCAAAATATGCTCTTGCTCTCATCAAATCCTTCCTTGCTGGAACTTCCATGCCTTCCCTTGACCTTGAGCTTGTCAGTGCCTATTGA 1473 0.4358 MNSPTCKAYMAKPSKLLVAFLAQILAIVAAISGNTVFALGTSSSSDLFVLQQLDRVDRLPGQTFKIDFKHYAGYVTVNQESGRALFYWFFEAASDPENKPIVLWLNGGPGCSSIAYGEADEIGPFHIRPDGKTLYLNPYSWNQVANVLFLDSPVGVGFSYSNTSSDILNNGDKRTAEDSLEFLLKWLERFPQYKGRDFYISGESYAGHYVPQLSQAIVNYNKNAKEKTINLKGYMVGNALTDDYNDRKGVAQFLWSSGLISDQTYQQMNLQCGNESFIYPPDSCVKILENADIEVGQIDKYSIFTPTCTANSSQTNQLVKRRHRIGRLRGVYDPCTWEHSTIYFNLPEVQEALHVDPAHKPAKWDTCSEEVHGNWKDSPLTVLDVYRELIPTGLRIWVFSGDTDGMIPVTSTRYSIDALKLKTVSPWRPWYDDGQVGGWTQEYEGLTFVAVRGAGHEVPLHRPKYALALIKSFLAGTSMPSLDLELVSAY 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1049 490 ProSitePatterns Serine carboxypeptidases, histidine active site. 446 463 IPR033124 GO:0004185
Mibi13g1049 490 Gene3D alpha/beta hydrolase 51 310 IPR029058 -
Mibi13g1049 490 Gene3D - 335 372 - -
Mibi13g1049 490 Pfam Serine carboxypeptidase 60 475 IPR001563 GO:0004185|GO:0006508
Mibi13g1049 490 Gene3D - 382 476 - -
Mibi13g1049 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 186 211 IPR001563 GO:0004185|GO:0006508
Mibi13g1049 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 149 IPR001563 GO:0004185|GO:0006508
Mibi13g1049 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 150 160 IPR001563 GO:0004185|GO:0006508
Mibi13g1049 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 446 459 IPR001563 GO:0004185|GO:0006508
Mibi13g1049 490 FunFam Carboxypeptidase 50 310 - -
Mibi13g1049 490 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 55 463 IPR001563 GO:0004185|GO:0006508
Mibi13g1049 490 FunFam Carboxypeptidase 382 476 - -
Mibi13g1049 490 ProSitePatterns Serine carboxypeptidases, serine active site. 200 207 IPR018202 GO:0004185
Mibi13g1049 490 SUPERFAMILY alpha/beta-Hydrolases 55 479 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1049 Mibi-ChrMibi13 13401528 13406184 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1049 328 479 Calmodulin-binding Proteins AT2G22960 24.375 1.45e-11 61.6