Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1048 ATGGATAGCCCCACTTGTAAGGGATACATGGCAAAACCTAATAAGTTGCTATTTACTTTTTTGGCTCAGATTTTAGCTATAGTAGCCGCAGTTTCGGGGAATACTGCGTTTGCTTTGGGTACATCTTCTTCTACTTCTTCTTCCTCGGACCCGTTTGTTCTGCAACAACTGGACAGGGTTGATAGGCTGCCAGGTCAAACTTTTAACATAGACTTCAAACATTATGCTGGGTATGTCACAGTCAACCAGGAATCTGGGAGGGCACTGTTTTACTGGTTCTTTGAAGCTGCTTCTGACCCTGAAACCAAGCCTATTGTTCTTTGGCTCAATGGAGGGCCTGGATGTTCATCCATTGCTTATGGGGAAGCAGAGGAGATTGGCCCCTTTCACATTCAGCCAGATGGCAAGACCCTTTATCTAAATCCGTACTCTTGGAATCAAGTTGCCAATCTTCTTTTTCTTGATTCTCCTGTTGGAGTTGGATTTTCGTATTCAAACACTTCATCTGACATACTGAACAATGGTGATAAGAGGACTGCTGAGGACTCTTTGGAATTTCTGTTGAAGTGGTTAGAGAGATTTCCTCAGTATAAAGGAAGAGATTTCTATATCTCTGGTGAAAGCTATGCAGGGCATTATGTTCCTCAACTTAGCCAAGTTATTGTGAATTACAACAAGAACGCCAAAGAAAAAACTATCAATCTGAAAGGCTATATGGTAGGAAATGCTCTAACTGATGATTACAATGATCGCAAGGGAGTTGCCCAGTTTTTGTGGTCATCCGGTTTGATCTCTGATCAAACATATCAGCAAATGAACCTTCAATGTGGCAATGAGTCTTTCCTAAATCCTCCAGATTCATGTGTAAAAATTTTAGAGAATGCTGACAAAGAAGTTGGCCAAATTGATATGTACAGTATCTTCACTCCTACATGCACTGCTAATTCTAGCCAGACAAACCAGCTGGTGAAAAGGAAGCACAGAATTGGCAGACTTAGGGCGGTCTATGATCCTTGCACTGAGAGGCACTCCACCATATACTTTAATCTACCTGAGGTCCAGGAGGCTCTTCATGTTGATCCAGCTCACAAGCCTGCCAAATGGGAGACCTGCAGTGACGAGGTAAATGGAAACTGGAAGGATTCTCCGTTGACAGTGCTTGATGTTTATCGTGAACTTATTCCAACAGGACTGAGAATATGGGTGTTCAGTGGTGACACAGATGGTGTGATCCCAGTGACATCCACTCGATACAGCATAGATGCTCTGAAGCTTAAAACTGTGGGCCCTTGGCGCCCTTGGTACAATGATGGGCAAGTGGGAGGATGGACCCAAGAATATGAAGGATTGACTTTTGTAGCAGTAAGAGGGGCAGGGCATGAAGTTCCTCTGCACAGACCAAAATATGCTCTTGCTCTCATTAAATCCTTCCTTGCTGGAACTTCCATGCCTTCCCTTGACCTTGAGCTTGTCAGTGCCTATTGA 1485 0.437 MDSPTCKGYMAKPNKLLFTFLAQILAIVAAVSGNTAFALGTSSSTSSSSDPFVLQQLDRVDRLPGQTFNIDFKHYAGYVTVNQESGRALFYWFFEAASDPETKPIVLWLNGGPGCSSIAYGEAEEIGPFHIQPDGKTLYLNPYSWNQVANLLFLDSPVGVGFSYSNTSSDILNNGDKRTAEDSLEFLLKWLERFPQYKGRDFYISGESYAGHYVPQLSQVIVNYNKNAKEKTINLKGYMVGNALTDDYNDRKGVAQFLWSSGLISDQTYQQMNLQCGNESFLNPPDSCVKILENADKEVGQIDMYSIFTPTCTANSSQTNQLVKRKHRIGRLRAVYDPCTERHSTIYFNLPEVQEALHVDPAHKPAKWETCSDEVNGNWKDSPLTVLDVYRELIPTGLRIWVFSGDTDGVIPVTSTRYSIDALKLKTVGPWRPWYNDGQVGGWTQEYEGLTFVAVRGAGHEVPLHRPKYALALIKSFLAGTSMPSLDLELVSAY 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1048 494 SUPERFAMILY alpha/beta-Hydrolases 60 483 IPR029058 -
Mibi13g1048 494 ProSitePatterns Serine carboxypeptidases, serine active site. 204 211 IPR018202 GO:0004185
Mibi13g1048 494 Gene3D - 339 377 - -
Mibi13g1048 494 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 59 467 IPR001563 GO:0004185|GO:0006508
Mibi13g1048 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 141 153 IPR001563 GO:0004185|GO:0006508
Mibi13g1048 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 154 164 IPR001563 GO:0004185|GO:0006508
Mibi13g1048 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 190 215 IPR001563 GO:0004185|GO:0006508
Mibi13g1048 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 450 463 IPR001563 GO:0004185|GO:0006508
Mibi13g1048 494 ProSitePatterns Serine carboxypeptidases, histidine active site. 450 467 IPR033124 GO:0004185
Mibi13g1048 494 Gene3D alpha/beta hydrolase 55 314 IPR029058 -
Mibi13g1048 494 Pfam Serine carboxypeptidase 64 479 IPR001563 GO:0004185|GO:0006508
Mibi13g1048 494 FunFam Carboxypeptidase 386 480 - -
Mibi13g1048 494 Gene3D - 386 480 - -
Mibi13g1048 494 FunFam Carboxypeptidase 54 314 - -
Mibi13g1048 494 FunFam Carboxypeptidase 336 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1048 Mibi-ChrMibi13 13392039 13396283 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1048 349 483 Calmodulin-binding Proteins AT2G22960 24.265 2.44e-10 58.2