Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1039 ATGCAGCAAGGTGATCAGACGGTTATTAGCTTGAGGCCTGGTGGTGGTCGTCCTGGAGGTGGTAGCAGATTCCTTGCTCCTCGATTCGATTCATCCTCATCGGCTTCTTCTGCTTCTGATCCTTCTCGTCCCTATGCCCTTAAGGCTGGAGATTCACGGTTTGAGGGTCGTGAGCATGTGCGGTACACTAGGGATCAGCTTTTACAGCTGAGGGAGGTTGAAGAGATCCCTGAAGATATTTTAAAAATTAAACAAGAAATAGAAACTGAACTTTTGGGTGAAGATCAAAGCTGGGGCCGTGCAGAAAATTCTGCACAACAATTTCAAAATCGATACTCTGAGCCAGACAACCGTGATTGGCGTGGCCGGTCTGGGCAACTTCCTGCTTCTGCAGAAGAGAAGTCATGGGAAAATCTGAGAGAAAATAGAGAATTTGGAAATCGGTTGGACTCAAGGAACCAGGATTCTAGTCAGTATAATCGGCAGGATCAACTGAATTCCCAGTTTGCAAGGGCACAGATTTCTTCGAACCAAGGAGGACCTGCTCCAACTTTAGTCAAGGCTGAGGTTCCATGGTCAGTTAGAAGAGGAAGCCTATCTGATAAGGATCGTGTCTTGAAAACTGTTAAAGGAATTCTAAACAAGCTTACCCCTGAGAAATTTGATGTCCTGAAGGGTCAATTGATTGACTCTGGAATTACATCTGCTGACATCTTGAAGGGAGTCATTTCACTTATATTTGATAAGGCTGTTCTAGAGCCAACATTTTGCCCCATGTATGCTCTTCTTTGTTCCGATCTTAATGAAAAGCTGCCTCAATTCCCATCTGATGAGCCTGGTGGGAAGGAAATCACTTTTAAGAGAGTACTGTTGAATAACTGCCAGGAGGCTTTTGAAGGTGCTGCCAAATTGAGGGAGGAAGTGAGGCAGATGACTGCTCCTGAGCAAGAGATGGAGCGTAGGGATAAGGAAAGACTGGTTAAGCTTCGTACTCTTGGGAATATCAGACTAATTGGAGAGCTGTTGAAGCAGAAGATGGTTACTGAAAAGATAGTCCATCACATTGTTCAGGAACTTTTGGGATCTGATAGCAAGTCCTGTCCAGTTGAGGAAAACGTTGAAGCCATATGCCAATTTTTCAATACTATTGGTAAACAACTCGATGAAAACCAAAAATCACGGCGTATTAATGACATGTACTTTGGTCGATTGAAAGAACTGAGCTCAAATCCTCAACTTGTATCACGGTTGAGGTTCATGATTCGTGATGTTCTTGATTTACGTGCTAACAACTGGGTTCCAAGACGGGAGGAGGTGAAAGCAAAAACCATCACTGAAATTCATTCAGAAGCTGAAAAGAATCTTGGATTGCGGCCAGGTGCTACTGCAAGCATTAGAAATAACCGTGCTGCAGCTTCTGGTGTTCAAGGAAACATAGGCCCTGGTGGATTTCCGATTTCTCGACTTGGTACAGGAGGTATGATGCCTGGCATGCCAGGGACCAGGAAGATGCCTGGGATGCCTGGAATAGATAATGACAATTGGGAAGTGCCTAGGGGAAGATCAATGCCTAGAGGAGATGTGTTAGGTATGCAAGCTGCTGGACGGGGCCAGTCTCCTTTACTTTCGAAGTCATCAGCTCTGAACTCAAAGCTATTACCTCAAGGTAGTGGTGGTCTCATAAGTGGAAGAAACAGCGCCCTAGTGCATGGTGGTGGTGGTGCTCCTCCATCTTCCCGTCCATCAAACTTCGTTTCTGGTGCTGAGCCTGCATCTCAAATCCCTACATCTGTGAAAGCCGTTCCTAGTGCGTCCTTTGAGAAGCCACAGGCTCCAGCTCCAAAATTAAATTTTGATGATCTTCGTCGGAAAACTGTCGCTCTTCTGGAAGAATATTTCAGTGTCCGTATTTTAGACGAGGCGTTACAGTGTGTGGAAGAACTAAATGCTCCATCTTACCACCCCGAGTTTGTGAAGGAGGCTATTATCCTCGCACTAGATCGAAGTCCACCCTGTGCTGATATTGTCGCCAATCTTCTTGAGTATCTTTTAATTAAGAAGATTCTTACTGCTAGAGATATAGGGACTGGCTGTTTGTTGTTTGGTTCCATGCTAGACGACATCGGCATAGATTTACCTAAAGCACCAAATAATTTTGGTGAGATAATTGGGAAGCTAATTTTGGCTGGGGGACTGGATTTTAAGGTAGTGGTTGAGATCCTTAAGAAGGTGGAAGATGACTTTTTCCAGAAAACAATATTTGATGCTGCAATAAGGGTCGTTAGTGCTGCATTGGGCCAAGCCATTCTCGATTCACAAGCCTCTGATATCGACGCCTGCCGCAGTGTGCTAAACTGA 2358 0.4495 MQQGDQTVISLRPGGGRPGGGSRFLAPRFDSSSSASSASDPSRPYALKAGDSRFEGREHVRYTRDQLLQLREVEEIPEDILKIKQEIETELLGEDQSWGRAENSAQQFQNRYSEPDNRDWRGRSGQLPASAEEKSWENLRENREFGNRLDSRNQDSSQYNRQDQLNSQFARAQISSNQGGPAPTLVKAEVPWSVRRGSLSDKDRVLKTVKGILNKLTPEKFDVLKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYALLCSDLNEKLPQFPSDEPGGKEITFKRVLLNNCQEAFEGAAKLREEVRQMTAPEQEMERRDKERLVKLRTLGNIRLIGELLKQKMVTEKIVHHIVQELLGSDSKSCPVEENVEAICQFFNTIGKQLDENQKSRRINDMYFGRLKELSSNPQLVSRLRFMIRDVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGATASIRNNRAAASGVQGNIGPGGFPISRLGTGGMMPGMPGTRKMPGMPGIDNDNWEVPRGRSMPRGDVLGMQAAGRGQSPLLSKSSALNSKLLPQGSGGLISGRNSALVHGGGGAPPSSRPSNFVSGAEPASQIPTSVKAVPSASFEKPQAPAPKLNFDDLRRKTVALLEEYFSVRILDEALQCVEELNAPSYHPEFVKEAIILALDRSPPCADIVANLLEYLLIKKILTARDIGTGCLLFGSMLDDIGIDLPKAPNNFGEIIGKLILAGGLDFKVVVEILKKVEDDFFQKTIFDAAIRVVSAALGQAILDSQASDIDACRSVLN 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1039 785 MobiDBLite consensus disorder prediction 145 164 - -
Mibi13g1039 785 Pfam MA3 domain 621 733 IPR003891 -
Mibi13g1039 785 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 33 769 IPR045208 GO:0003743
Mibi13g1039 785 MobiDBLite consensus disorder prediction 95 137 - -
Mibi13g1039 785 FunFam Eukaryotic translation initiation factor isoform 4G-2 614 775 - -
Mibi13g1039 785 SUPERFAMILY ARM repeat 200 434 IPR016024 -
Mibi13g1039 785 Pfam MIF4G domain 206 431 IPR003890 GO:0003723|GO:0005515
Mibi13g1039 785 Gene3D - 198 432 - -
Mibi13g1039 785 MobiDBLite consensus disorder prediction 1 56 - -
Mibi13g1039 785 MobiDBLite consensus disorder prediction 99 113 - -
Mibi13g1039 785 MobiDBLite consensus disorder prediction 569 590 - -
Mibi13g1039 785 SUPERFAMILY ARM repeat 614 761 IPR016024 -
Mibi13g1039 785 Gene3D - 613 778 - -
Mibi13g1039 785 SMART ma3_7 621 733 IPR003891 -
Mibi13g1039 785 ProSiteProfiles MI domain profile. 620 742 IPR003891 -
Mibi13g1039 785 SMART if4_15 206 431 IPR003890 GO:0003723|GO:0005515
Mibi13g1039 785 FunFam Eukaryotic translation initiation factor isoform 4G-2 197 432 - -
Mibi13g1039 785 MobiDBLite consensus disorder prediction 27 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1039 Mibi-ChrMibi13 13286235 13291756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1039 1 783 Eukaryotic Initiation Factors Gene Family AT5G57870 63.546 0.0 977