Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1032 ATGGGAGTTGAAAGCAAGAAAGAGTGTAACTTGTATATGTGGTTACTACTACTGTTTTTGTCTTATTGTTGTTGTTCATCATCATCATCAACATGGTCTATGGAGGAAGATAGAATAAAGCAGTTGCCGGGGCAGCCGCCGGTGGGGTTCAGCCACTTCTCCGGCTATGTCACGGTGGAGCACCGACATGGGAGAGCGTTGTTTTACTGGCTCACTGAAGCCACCTCTTCACCTCACACTAAGCCTCTTCTTCTTTGGCTCAATGGAGGGCCTGGTTGTTCATCTGTAGCATATGGGGCATCAGAGGAAATTGGTCCATTTCGGATAAACAAAACTGGTTCTTCTCTATATCTTCACAAATATGCATGGAACAGAGAAGCAAATATCCTTTTTCTTGAATCGCCTGCTGGTGTTGGATTCTCCTACACAAATACAAGTTCGGACCTCAAAACTAGTGGGGACAAAAGAACAGCTCAAGATGCACTGGTCTTTCTGACTAGATGGATGTCAAGGTTTCCACACTATAAATACAGAGAATTTTACATCGCTGGAGAAAGCTATGCAGGGCATTATATTCCCCAGTTGGCAAAGCAAATCTATGATTATAATAAAGCACATCCACATATCATTAATCTAAAAGGGTTCATTGTGGGAAATGCTTTGATTGATGACTATTATGATGGGATTGGAACCATTACATATTGGTGGAGCCATGCTTTGATATCTGATCTCTCATACCATTCTATCCTCAAACACTGCAACTTTACATCAGAAAAGACTTCCAAAAAATGTGATGATGCAGTGAGTTATGCGGTTAACCATGAATTTGGAAACATTGATACATACAGTATTTATACCCCATCATGCACAACTCGGCCTAACAATACCTTAAGGTATATACGGTTCAAGAATACAATCTTACATAGGATTTCAGGGTATGATCCATGTACTGAAAATCGTGCAGAAACATATTATAACCTTCCCGAAGTGCAGCAAGCAATGCATGCAAATGTTACAAGCATCCCTTACAAATGGACTGCTTGCAGCAATGTGCTCCTAAGAAACTGGAAGGATTCTCCAGTTTCTGTATTGCCAATATACAAAGAGTTGATTGCGGCTGGTTTAAGAATATGGGTTTTCAGCGGGGACACAGATTCTGTGGTTCCAGTAACAGCAACCAGGTTTTCCCTCAACCATCTCAACCTCACCGTTAAAACTCGTTGGTATCCATGGTACTCAGGTGGACAGGTAGGCGGATGGACAGAAGTGTATGAAGGGCTCACATTTGCCACAGTGAGAGGAGCTGGACATGAGGTACCATTATTTCAGCCTAGGAGAGCATTCACACTCTTCAAATCTTTCTTAGCAGGGAAGGAGCTACCAATATCTTAA 1392 0.421 MGVESKKECNLYMWLLLLFLSYCCCSSSSSTWSMEEDRIKQLPGQPPVGFSHFSGYVTVEHRHGRALFYWLTEATSSPHTKPLLLWLNGGPGCSSVAYGASEEIGPFRINKTGSSLYLHKYAWNREANILFLESPAGVGFSYTNTSSDLKTSGDKRTAQDALVFLTRWMSRFPHYKYREFYIAGESYAGHYIPQLAKQIYDYNKAHPHIINLKGFIVGNALIDDYYDGIGTITYWWSHALISDLSYHSILKHCNFTSEKTSKKCDDAVSYAVNHEFGNIDTYSIYTPSCTTRPNNTLRYIRFKNTILHRISGYDPCTENRAETYYNLPEVQQAMHANVTSIPYKWTACSNVLLRNWKDSPVSVLPIYKELIAAGLRIWVFSGDTDSVVPVTATRFSLNHLNLTVKTRWYPWYSGGQVGGWTEVYEGLTFATVRGAGHEVPLFQPRRAFTLFKSFLAGKELPIS 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1032 463 ProSitePatterns Serine carboxypeptidases, serine active site. 182 189 IPR018202 GO:0004185
Mibi13g1032 463 Gene3D - 316 353 - -
Mibi13g1032 463 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 38 444 IPR001563 GO:0004185|GO:0006508
Mibi13g1032 463 SUPERFAMILY alpha/beta-Hydrolases 36 460 IPR029058 -
Mibi13g1032 463 ProSitePatterns Serine carboxypeptidases, histidine active site. 427 444 IPR033124 GO:0004185
Mibi13g1032 463 Gene3D - 363 457 - -
Mibi13g1032 463 Pfam Serine carboxypeptidase 44 456 IPR001563 GO:0004185|GO:0006508
Mibi13g1032 463 FunFam Carboxypeptidase 33 291 - -
Mibi13g1032 463 FunFam Carboxypeptidase 363 457 - -
Mibi13g1032 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Mibi13g1032 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 193 IPR001563 GO:0004185|GO:0006508
Mibi13g1032 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 427 440 IPR001563 GO:0004185|GO:0006508
Mibi13g1032 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Mibi13g1032 463 Gene3D alpha/beta hydrolase 33 291 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1032 Mibi-ChrMibi13 13234319 13242358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1032 321 460 Calmodulin-binding Proteins AT2G22960 29.787 3.06e-15 72.0