Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1026 ATGGTTAAAGTATCTTACTTTAGTGGTAAAGTGACTAAGTTTAGGCTGATTTTGGTGGGAGCATTCTGGATATTTGAGGTTGTATATATATCTGGTATTAGTGATCAACTTTCAAAGATGTTCGACGGTGGTTACAAGTCACAATACATGTGTAGCCAACGGGAGAAATTTGCGAGGTTGGATGAGTTGGACTCTAGACTATCTTCACCTTCTGATGCTAGACATAATAAATGTGGATTTGGTACATTTAAATCAAGCCATGGTGGTTATGCACGCATTGGAACTACTGGATCCTTTAAAAGAGGAATGAGAAAGGGATCTGAAGGGCTTAAGTCAATTGGCCGATCACTTGGATTTGGGGTATCACGGGCAGTCTTTCCAGAAGACCTTAAAGTATCAGAAAAGAAGATATTTGATCCTCAAGACAAATTCTTACTCTTGTGGAATAAGCTTTTTGTAATCTCTTGCATTTTGGCTGTCTCTATTGATCCATTGTTTTTTTATCTTCCTGTGATCAATGATTCAATAAACTGTCTTGGTATAGATCGAAACATGGCAGTCATTGTCACCACTCTGAGAACAGTTATAGATGCTTTTTACCTGATACGCATGGCTCTCCAATTTCGTACTGCTTACATAGCTCCATCATCTCGTGTCTTTGGACGAGGTGAACTTGTCATAGATCCGTCACAAATTGCCAAGCGATACATGCAGCGATATTTCATCATCGATTTCCTTTCAGTGTTGCCCTTGCCACAGATTGTAGTTTGGAGATTTCTTCAGAAGTCAAGAGGTTCACATGTATTGGCAACAAAGGAGGCCTTACTGTTTATTATCTTGCTTCAATATGTTCCTAGATTGCTTCGGATGGTACCATTGACTTCAGAACTTAAGAGAACAGCTGGTGTCTTTGCTGAAACTGCATGGGCAGGAGCTGCATATTATTTGCTATTATACATGCTAGCTAGTCATATGGTTGGGGCATTTTGGTACTTGTTAGCTGTTGAACGCAATGACTCTTGCTGGCAGAAGGCTTGTAGTGAAAATGGATGTAACAAAAATTTCTTGTATTGTGGCAACCAGCACATGGAAGGTTATAGTGCCTGGCAGAATAGAAGCAGAGATATTTTTAATACACAGTGCTCTGTGGATACGGAAAATCCACCTTTTGATTATGGAATATTTACCCAAGCATTTTCATCTGGGATTGTTTCATCTAAAACGTTCATCTCTAAATACTGCTACTGTTTATGGTGGGGGCTCCAGAATTTGAGTACACTTGGCCAAGGGCTTCAAACCAGCACCTACACAGGGGAGGTTATATTTTCAATAGCACTCGCCATTTTTGGGCTTATCCTCTTTGCACTCCTGATTGGTAACATGCAGACGTACCTTCAGTCTCTTACCATTAGGCTTGAGGAAATGAGAGTCAAAAGACGTGATTCAGAACAGTGGATGCATCATCGCTTGCTCCCCCATGAGCTTAGGGAGCGAGTCAGACGCTATGATCAATATAAGTGGCTGGCAACACGTGGGGTAGACGAAGAAAGTTTGGTGCAGAGTCTACCGAAGGATCTTAGAAGAGATATTAAGCGCCATCTTTGTCTGGCTTTAGTGAGAAGGGTTCCACTATTCGAAAGTATGGATGAGAGATTACTTGATGCAATTTGTGAGAGACTGCAACCATGCTTATTTACAGAGAATACTTACATTGTTCGTGAAGGAGATCCAGTTGATGAGATGCTTTTCATCATCCGTGGTCGCCTTGAGAGTGTTACCACAGATGGCGGGAGAAGTGGATTTTTCAACCGCACTTTCCTAAAAGAGACAGACTTTTGCGGTGAGGAGCTTTTAACTTGGGCCTTGGATCCCAAGTCTGGTTCCAACCTTCCATCTTCTACTAGAACAGTTAAGACACTTGCAGAGGTTGAGGCTTTTGCATTGATTTCTGAAGACTTAAAGTTTGTTGCAAGTCAATTTAGGCGCCTCCATAGCAGGCAGGTTCAACACACCTTCCGGTTCTACTCACAGCAATGGAGAACTTGGGCTGCTTGCTTTATTCAAGCAGCCTGGCGTCGTTATTGCAAGAGAAAGATTATGGAGCTTCGCCGGAAGGAAGAATCCGAGGAATCGGAAAGTTTTCGCAACAATGCCAGTGGTGGTTCATACAGCATCAGCGCTACCTTCTTAGCCTCAAGATTTGCAGCTAATGCTCTTCGTGGTATACAACGCAATAGGAATGCCAAGACTGCCAGGGAATTGGTTAAACTTCAAAAGCCACCGGAGCCTGACTTTACTGCAGATGAATGA 2310 0.4229 MVKVSYFSGKVTKFRLILVGAFWIFEVVYISGISDQLSKMFDGGYKSQYMCSQREKFARLDELDSRLSSPSDARHNKCGFGTFKSSHGGYARIGTTGSFKRGMRKGSEGLKSIGRSLGFGVSRAVFPEDLKVSEKKIFDPQDKFLLLWNKLFVISCILAVSIDPLFFYLPVINDSINCLGIDRNMAVIVTTLRTVIDAFYLIRMALQFRTAYIAPSSRVFGRGELVIDPSQIAKRYMQRYFIIDFLSVLPLPQIVVWRFLQKSRGSHVLATKEALLFIILLQYVPRLLRMVPLTSELKRTAGVFAETAWAGAAYYLLLYMLASHMVGAFWYLLAVERNDSCWQKACSENGCNKNFLYCGNQHMEGYSAWQNRSRDIFNTQCSVDTENPPFDYGIFTQAFSSGIVSSKTFISKYCYCLWWGLQNLSTLGQGLQTSTYTGEVIFSIALAIFGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPHELRERVRRYDQYKWLATRGVDEESLVQSLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLQPCLFTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRTFLKETDFCGEELLTWALDPKSGSNLPSSTRTVKTLAEVEAFALISEDLKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYCKRKIMELRRKEESEESESFRNNASGGSYSISATFLASRFAANALRGIQRNRNAKTARELVKLQKPPEPDFTADE 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1026 769 FunFam Cyclic nucleotide-gated ion channel 1 471 535 - -
Mibi13g1026 769 Gene3D Jelly Rolls 542 662 IPR014710 -
Mibi13g1026 769 Gene3D Helix hairpin bin 472 535 - -
Mibi13g1026 769 SUPERFAMILY cAMP-binding domain-like 473 663 IPR018490 -
Mibi13g1026 769 Pfam Ion transport protein 147 470 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mibi13g1026 769 FunFam Cyclic nucleotide-gated ion channel 1 542 660 - -
Mibi13g1026 769 ProSiteProfiles IQ motif profile. 680 709 IPR000048 GO:0005515
Mibi13g1026 769 SMART cnmp_10 544 675 IPR000595 -
Mibi13g1026 769 Gene3D - 150 469 - -
Mibi13g1026 769 PRINTS EAG/ELK/ERG potassium channel family signature 321 331 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi13g1026 769 PRINTS EAG/ELK/ERG potassium channel family signature 204 213 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi13g1026 769 PRINTS EAG/ELK/ERG potassium channel family signature 439 450 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi13g1026 769 PRINTS EAG/ELK/ERG potassium channel family signature 507 514 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi13g1026 769 PRINTS EAG/ELK/ERG potassium channel family signature 457 466 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi13g1026 769 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 129 765 - -
Mibi13g1026 769 SUPERFAMILY Voltage-gated potassium channels 139 466 - -
Mibi13g1026 769 ProSiteProfiles cAMP/cGMP binding motif profile. 544 628 IPR000595 -
Mibi13g1026 769 CDD CAP_ED 544 675 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1026 Mibi-ChrMibi13 13166252 13171957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1026 40 769 Ion Channels AT2G23980 74.800 0.0 1146