Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1018 ATGGGTTTTGGGGCATTTGGCTCCATTGTAGTTCTGACGTTTTTCTTTGAGCATTTGGCTTGCCAGCAACCAAATACTGATGATTTCTATGTGTCTGACTTCTTCAAGAACATGAGTTTAGCATCACCATCACCATCATCATCTTCCTCACAAGTAGCCTTCAACTTCTCTGCTTCTGTTTGTTCATGGCCAGGTGTTATCTGTGATGCTAATAAAGAACATGTTGTTGAGTTTAAAGCTTCTGGTTTGGGACTCTCTGGCCCTATTCCTGATAATACCATTGGCAAGCTCAGCAAGTTACAAATTTTGGATCTTAGTGACAATAAAATCACTGCTTTGCCTTCTGATTTCTGGAGCTTAGGCTCTTTGGAGATTCTTAACCTCTCCTCCAATCAGATATCAGGTTCACTTGCTAGCAACTTTGGGAACTTTGGTCACCTTGAAATCTTAGACTTGTCCAGCAACCATTTTTCTGGGGAAATTCCTGAAGCTATTAGCTCCCTTGTGAGTTTAAAGATCCTCAAACTTGAGAAAAATAGGTTTAAGCAGAACATACCTTCTGGGATTTTACAGTGTCAGTCTCTGGTTTATGTTGATCTTTCACGAAATCAGCTTAATGGCACTCTTCCTGAAGGTTTTGGAGCTGCTTTTCCTAACCTTGAAAGCTTGAACCTTGCTGGGAATAATCTTCATGGTCATGATTCAGATTTTTCAGGATTGAAATCCATTACTAGTATTAACATATCTGCAAATTCCTTTCAGGGTTCTTTTTTGGGTATGTTTCTGGAACAGTTGGAGGTAATTGACCTTAGCAGGAACCAGTTTGAGGGTCAGATCTCTCAGGTAAAGCTCAAGAACAATTCGTCTCATTTGGTTTATCTGGATTTATCTGAGAATAGGCTTAGTGGGGAAATTTTTCAGTATCTGAATGAAGCCCAGAATCTTAAACACCTTAATTTGGCACACAATAGGTTTGCAAGTCAGAAATTTCCAAAGATTGAAAACCTCTCAAGATTGGAATATCTGAACTTGTCCAAAGCTAGTCTGCATGGCCACATTCCTGCTGAAATATCAAAGTTGAGTAATTTGAGTTCACTTGATATTTCTCTGAATAATCTTATTGGGGGTATTCCATTTCTAAGAAGTGAAAACCTCCAAATTCTTGACCTTTCATACAACAATTTGAGTGGAGAAATCCCTCAAACTGTTCTGGAGAAACTCCCATCAATGGAGAAATATAACTTCTCTTATAATAACTTAACCTTCTGTTCTTTGGGAATCAACCCCAACATCCTGCAAACAGCATTCTATGGATCATCAGACAATTGCCCGATTGCTGCGAATCCGAAGCTTTTCAAAAGAACCAATGAACGCAAGGGAATGAAGCTAGCTCTGGCATTGACCCTCTCAATGGTCTGCTTACTTTCTGGCCTTTTATTTCTAGCATTTGGTTGCAGAAGGAGAACAAAATCATGGGCAATTAAGCAAACTTCATTCAAAGAAGAGCAGAACATTTCGGGTCCCTTCTCATTCCAGACTGATTCAACTACCTGGGTGGCTGATGTCAAGCAAGCAAACTCAGTCCCCGTAGTAATCTTTGAGAAGCCATTACTCAACATTACATTTGCAGATCTCTTGTACTCAACTTCAAACTTCGACCGGGGTACTCTCTTGGCTGAAGGCAAATTCGGGCCTGTTTACCGAGGTTTTCTACCCAGTGGCATTCATGTGGCAGTTAAAGTTTTGGTTGTTGGGTCTACATTGACAGATCAAGAAGCTGCTAAAGAACTCGAGCATCTTGGTCGGATCAAGCACCCGAATCTTGTTCCCCTAACTGGATATTGCTTTGCTGGGGATCAAAGGATTGCCATATATGATTACATGGAGAATGGGAACTTGCAAAACTTCCTTCATGACTTGCCACTTGGGGTACAGAGGACAGATGATTGGAGCACAGACACATGGGAAGAAGGAGATGACATGAATGGAATTCAAAAGGCTAGCTCCGAGGGATTATCACTCTCATCTTGGCGATTTCGACACAAAATTGCTCTTGGTACTGCTCGAGCATTGGCATTTCTTCATCATGGCTGCTCTCCTTCGATCATTCATAGAGATGTTAAAGCTAGCAGTGTCTACTTGGACTATAACTTGGAGCCCAGGCTATCAGATTTTGGGCTGGCCAAAATTTTTGGAAGCAGTTTGGATGAGGAGATTGCTCGAAGCTCACCCGGCTATGTTCCACCCGAGTTTTCTCAACCTGATTATGACCTCCCAACACCAAAATCTGATGTGTACTGTTTTGGAGTTGTACTCTTTGAGCTGATAACAGGAAAAAAGCCAGTTGGGGATGATTATCCTGAAGAGAAAGAAGGGACTTTAGTAAGTTGGGTGAGAGCATTGGTAAGAAAGAACCTAGCTTCAAGAGCTATTGATCCAAAAATTAGTGATACAGGAATTGATGATCAAATTGAAGAAGCACTTAAGATTGGTTATCTATGTACTGCTGATCTTCCCTCTAAGCGACCTAGCATGCAGCAGATAGTGGGACTTTTGAAAGATATTGAGCCTGCTTCTGGGGAAATATCATAA 2592 0.4113 MGFGAFGSIVVLTFFFEHLACQQPNTDDFYVSDFFKNMSLASPSPSSSSSQVAFNFSASVCSWPGVICDANKEHVVEFKASGLGLSGPIPDNTIGKLSKLQILDLSDNKITALPSDFWSLGSLEILNLSSNQISGSLASNFGNFGHLEILDLSSNHFSGEIPEAISSLVSLKILKLEKNRFKQNIPSGILQCQSLVYVDLSRNQLNGTLPEGFGAAFPNLESLNLAGNNLHGHDSDFSGLKSITSINISANSFQGSFLGMFLEQLEVIDLSRNQFEGQISQVKLKNNSSHLVYLDLSENRLSGEIFQYLNEAQNLKHLNLAHNRFASQKFPKIENLSRLEYLNLSKASLHGHIPAEISKLSNLSSLDISLNNLIGGIPFLRSENLQILDLSYNNLSGEIPQTVLEKLPSMEKYNFSYNNLTFCSLGINPNILQTAFYGSSDNCPIAANPKLFKRTNERKGMKLALALTLSMVCLLSGLLFLAFGCRRRTKSWAIKQTSFKEEQNISGPFSFQTDSTTWVADVKQANSVPVVIFEKPLLNITFADLLYSTSNFDRGTLLAEGKFGPVYRGFLPSGIHVAVKVLVVGSTLTDQEAAKELEHLGRIKHPNLVPLTGYCFAGDQRIAIYDYMENGNLQNFLHDLPLGVQRTDDWSTDTWEEGDDMNGIQKASSEGLSLSSWRFRHKIALGTARALAFLHHGCSPSIIHRDVKASSVYLDYNLEPRLSDFGLAKIFGSSLDEEIARSSPGYVPPEFSQPDYDLPTPKSDVYCFGVVLFELITGKKPVGDDYPEEKEGTLVSWVRALVRKNLASRAIDPKISDTGIDDQIEEALKIGYLCTADLPSKRPSMQQIVGLLKDIEPASGEIS 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1018 863 SUPERFAMILY L domain-like 35 429 - -
Mibi13g1018 863 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 114 209 - -
Mibi13g1018 863 FunFam Putative LRR receptor-like serine/threonine-protein kinase 513 627 - -
Mibi13g1018 863 Gene3D Transferase(Phosphotransferase) domain 1 628 861 - -
Mibi13g1018 863 SUPERFAMILY Protein kinase-like (PK-like) 528 852 IPR011009 -
Mibi13g1018 863 ProSiteProfiles Leucine-rich repeat profile. 99 120 IPR001611 GO:0005515
Mibi13g1018 863 Gene3D Phosphorylase Kinase; domain 1 512 627 - -
Mibi13g1018 863 ProSiteProfiles Protein kinase domain profile. 552 859 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g1018 863 Pfam Leucine Rich repeat 383 398 IPR001611 GO:0005515
Mibi13g1018 863 Pfam Leucine Rich repeat 288 304 IPR001611 GO:0005515
Mibi13g1018 863 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 262 423 - -
Mibi13g1018 863 FunFam Calmodulin-binding receptor kinase CaMRLK 263 379 - -
Mibi13g1018 863 Pfam Leucine rich repeat 194 252 IPR001611 GO:0005515
Mibi13g1018 863 Pfam Leucine rich repeat 89 133 IPR001611 GO:0005515
Mibi13g1018 863 Gene3D Ribonuclease Inhibitor 192 279 IPR032675 -
Mibi13g1018 863 Gene3D Ribonuclease Inhibitor 280 451 IPR032675 -
Mibi13g1018 863 SMART LRR_sd22_2 382 409 - -
Mibi13g1018 863 SMART LRR_sd22_2 97 130 - -
Mibi13g1018 863 SMART LRR_sd22_2 288 311 - -
Mibi13g1018 863 SMART LRR_sd22_2 312 338 - -
Mibi13g1018 863 SMART LRR_typ_2 120 143 IPR003591 -
Mibi13g1018 863 SMART LRR_typ_2 144 167 IPR003591 -
Mibi13g1018 863 SMART LRR_typ_2 168 192 IPR003591 -
Mibi13g1018 863 SMART LRR_typ_2 336 360 IPR003591 -
Mibi13g1018 863 SMART LRR_typ_2 97 119 IPR003591 -
Mibi13g1018 863 SMART LRR_typ_2 217 239 IPR003591 -
Mibi13g1018 863 SMART LRR_typ_2 383 406 IPR003591 -
Mibi13g1018 863 PRINTS Leucine-rich repeat signature 120 133 - -
Mibi13g1018 863 PRINTS Leucine-rich repeat signature 100 113 - -
Mibi13g1018 863 Pfam Protein tyrosine and serine/threonine kinase 556 850 IPR001245 GO:0004672|GO:0006468
Mibi13g1018 863 SMART serkin_6 552 859 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g1018 863 Gene3D Ribonuclease Inhibitor 34 191 IPR032675 -
Mibi13g1018 863 Pfam Leucine Rich Repeat 146 168 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1018 Mibi-ChrMibi13 13096198 13098789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1018 74 855 Receptor kinase-like Gene Family AT5G07280 32.258 1.35e-110 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Mibi13g1018 PK_Tyr_Ser-Thr 3.6e-32 CL0016