Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1014 ATGGCCGAACAAGGCAAAAACTGTAACTCCACTCTCCTCCATGGAAAATACGAGCTAGGCCGTCTTCTTGGTCACGGAACATTCGCGAAGGTATACCATGCTCGCAATTTACAGACAGGGAAAAGCGTGGCGATGAAGGTGTTGTCAAAAGAGAAGGTGATAAAGGTGGGAATGATGGAACAAATCAAGAGAGAAATCTCAGTTATGAACATGGTGAAACATCCCAACATTGTCCAGCTTTACGAAGTCATGGCAAGCAAATCCAAGATCTACATTTCCATGGAGCTAATTCGAGGCGGCGAGCTTTTCAACAAAATCGCCAAAGGAAGATTGAAAGAAGATTCAGCCAGATTCTATTTCCAGCAATTAATCTCCGCCGTCGATTTCTGCCACAGCCGCGGCGTTTTCCACCGTGACCTCAAGCCGGAGAATCTCCTACTCGACGAAGACGGAAACCTCAAAGTCACCGATTTCGGCCTATGTTCTTTCTCTGAACATTTAAGGCAAGATGGTTTGTTGCATACAACTTGTGGTACTCCGGCGTATGTCTCGCCGGAGATAATTAGTAAAAAGGGATACGACGGCGCGAAATCGGATATTTGGTCTTGTGGGGTTATCTTATATGTTCTTCTGGCTGGATTTTTACCATTTCAGGATGAGAATTTGGTGTCAATGTATAAGAAGATTTACAAGGGAGATTTCAGATGTCCGCCATGGTTTTCGCCGGAAGCCCGGCGACTAATCACGAAGCTTCTCGATCCAAACCCCAGCACACGAATAACGATTTCTAAAATCATGCAATCGTCGTTCTTCAAGAAATCGATCCCGAGGAATTTGGGGGCGAAAACATGGAAGGAATTGGGAGTGGAATGCGAGGATGAAGATGATGGTTTCGAGAAATTGTCGAAGGAGAGTCCACCGGCGACGATGAATGCGTTCCATTTGATATCGTTGTCGGAAGGGTTCGATTTGTCGCCGCTTTTTTCTGGGAAGAGGGAGGAGAAGGAGGAGATGAGGTTCGCCACGGCGAGGCCGGCGAGTAGCGTGATATCGAGGTTGGAGGAGGTGGCGGCGGCGGAGAGGTTCACCGTGAAGAAGAGTGAGACCATGGTGAGGTTGATGAGGCAGGAGAGCGGCCGGAAAGGGCGGTTGGCGATCGCGGCGGAGATTTACGCCGTCTCGCCGTCGTTGGCGGTGGTGGAAGTTAAGAAGGATAACGGTGATACCTTAGAGTATAACCAATTTTGTAATAAGGAGCTCCGACCGGCTCTCAAAGACATTGCATGGACATCGCCGTCGGATAGCCCGGCCCGATCCGACCCATAA 1326 0.4894 MAEQGKNCNSTLLHGKYELGRLLGHGTFAKVYHARNLQTGKSVAMKVLSKEKVIKVGMMEQIKREISVMNMVKHPNIVQLYEVMASKSKIYISMELIRGGELFNKIAKGRLKEDSARFYFQQLISAVDFCHSRGVFHRDLKPENLLLDEDGNLKVTDFGLCSFSEHLRQDGLLHTTCGTPAYVSPEIISKKGYDGAKSDIWSCGVILYVLLAGFLPFQDENLVSMYKKIYKGDFRCPPWFSPEARRLITKLLDPNPSTRITISKIMQSSFFKKSIPRNLGAKTWKELGVECEDEDDGFEKLSKESPPATMNAFHLISLSEGFDLSPLFSGKREEKEEMRFATARPASSVISRLEEVAAAERFTVKKSETMVRLMRQESGRKGRLAIAAEIYAVSPSLAVVEVKKDNGDTLEYNQFCNKELRPALKDIAWTSPSDSPARSDP 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1014 441 Gene3D Kinase associated domain 1, KA1 304 430 - -
Mibi13g1014 441 ProSiteProfiles Protein kinase domain profile. 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g1014 441 Gene3D Transferase(Phosphotransferase) domain 1 97 276 - -
Mibi13g1014 441 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Mibi13g1014 441 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Mibi13g1014 441 FunFam Non-specific serine/threonine protein kinase 8 96 - -
Mibi13g1014 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Mibi13g1014 441 Pfam NAF domain 307 366 IPR004041 GO:0007165
Mibi13g1014 441 CDD STKc_SnRK3 16 270 - -
Mibi13g1014 441 Pfam Protein kinase domain 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g1014 441 SMART serkin_6 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g1014 441 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 426 - -
Mibi13g1014 441 CDD CIPK_C 311 425 - -
Mibi13g1014 441 Gene3D Phosphorylase Kinase; domain 1 10 96 - -
Mibi13g1014 441 SUPERFAMILY Protein kinase-like (PK-like) 14 281 IPR011009 -
Mibi13g1014 441 FunFam Non-specific serine/threonine protein kinase 305 429 - -
Mibi13g1014 441 FunFam Non-specific serine/threonine protein kinase 7 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1014 Mibi-ChrMibi13 13026542 13027867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1014 3 431 CBL-interacting serine-threonine protein kinases AT4G30960 71.594 0.0 614
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mibi13g1014 Pkinase 3.5e-75 CL0016