Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1013 ATGCAGCCAAATAGCAACGAAATGCAAGCAGGAATCAATTCTTCTTCCTCTTCTTCCCCCATGAATTCCCTCCACCACCAGATCCAACCACCATCACATGATCTTCACGACGATTTTCTCGACCAAATGCTCTCTAATCTTCCTTCCTTTTGGGACCACCAACTCAATTCCTCCGACAATAACGCTAACAATGCCGCCGATTTCCACTACGACGACAAGTTCCCCAACCACCAGATCCCTCCTCCCTCCTCCTCCGCCGCCGAGGCCGTCGCTTTGATGCTTCAGCGGCAGCTTCTCATGTCCAGAGGAATCTCCGGCGACTCTGGCCTTCTTCAGATGCCTTTGTCTCTCGCTCCTGGAAACGACGTCGTTGATGGTTCCTCCTTCAAATCTCACATTCCGGCTGGTGATGGTTCTGTTCAATCTCTCTTTAATGGGTTCGCTGGATCTATGCATGATGCGCACCAACCTTCCAATCAAACCCAACATTTCCATCATCCTCAGGGGCAGAATTTTGGAGGGGCAGGGGCGGCGGCGGCGGCGAACGGAGCTCCGGCGCAGCCGAAGCAGAGGGTTAGGGCAAGGAGGGGTCAGGCGACGGACCCACACAGTATAGCAGAGAGGTTACGAAGGGAGAGAATTGCAGAGAGAATGAAGGCACTGCAAGAACTGGTTCCTAATGCTAACAAGACAGATAAGGCTTCAATGCTGGACGAGATCATAGACTATGTCAAGTTCTTACAGCTCCAAGTGAAGGTTCTGAGTATGAGCAGATTGGGGGGTGCTGCTGCTGTTGCTCCTCTTGTTGCTGATATCTCCTCTGAGGGAGGAGGAGGTGACTGCATCCAGGCCGCCGCCAACGCCGCCGCCGGCCACACCAACGGCAACCAAACGGCGTCGTCCTCCAACGACACCGTCACCATGACGGAGCAACAGGTGGCGAAGCTGATGGAAGAAGACATGGGCTCCGCCATGCAATACCTTCAAGGCAAAGGTCTGTGCCTCATGCCCATATCTCTCGCCACCGCCATCTCCACCGCCACCTGTCCCTCCCGGAGCCCCCTCGCCGCCGCCGCCGCCGCCAACGGCAACGGAAGGGAGGGGCCGCCGTCTCCAAGCATGTCGGTGCTGACCGTACAGTCGGTGACGGCGGCTAACGACGGCGCCGTTAAAGATGCCGCCTCCGTTTCCAAGCCGTGA 1200 0.5642 MQPNSNEMQAGINSSSSSSPMNSLHHQIQPPSHDLHDDFLDQMLSNLPSFWDHQLNSSDNNANNAADFHYDDKFPNHQIPPPSSSAAEAVALMLQRQLLMSRGISGDSGLLQMPLSLAPGNDVVDGSSFKSHIPAGDGSVQSLFNGFAGSMHDAHQPSNQTQHFHHPQGQNFGGAGAAAAANGAPAQPKQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADISSEGGGGDCIQAAANAAAGHTNGNQTASSSNDTVTMTEQQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCPSRSPLAAAAAANGNGREGPPSPSMSVLTVQSVTAANDGAVKDAASVSKP 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1013 399 MobiDBLite consensus disorder prediction 1 29 - -
Mibi13g1013 399 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 43 344 - -
Mibi13g1013 399 MobiDBLite consensus disorder prediction 152 168 - -
Mibi13g1013 399 MobiDBLite consensus disorder prediction 149 205 - -
Mibi13g1013 399 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 196 258 IPR036638 GO:0046983
Mibi13g1013 399 MobiDBLite consensus disorder prediction 1 37 - -
Mibi13g1013 399 Pfam Helix-loop-helix DNA-binding domain 203 248 IPR011598 GO:0046983
Mibi13g1013 399 SMART finulus 204 253 IPR011598 GO:0046983
Mibi13g1013 399 FunFam Transcription factor bHLH66 195 260 - -
Mibi13g1013 399 Gene3D - 193 255 IPR036638 GO:0046983
Mibi13g1013 399 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 198 247 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1013 Mibi-ChrMibi13 12988541 12991907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1013 184 398 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 65.086 1.07e-92 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi13g1013 HLH 1.5e-09 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi13g1013 13 12988541 12991907 Mibi13g1013 13 12988541 12991907 ECH