Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0992 ATGACTCTGGCGGACCAAAGGTGTGATTTGGGTAATGACAATGGGGCTGCGAAAAAGTTCCCTTTTGGTATGAGTGTTTTGGCGGTTGACGACGACCCAATTTGTCTCAAAGTGTTGGAGACTCTGCTTGTTAAATGCGAGTATCAAGTTACTACAACTAATCAGGCGGTTAAAGCTTTGAAACTGCTAAGGGAAAACAGGAACAAGTTTGACCTGGTCATTAGTGATGTAAACATGCCAGACATGGATGGATTTAAGCTCCTTGAGCTAGTGGGACTTGAAATGGACCTACCAGTCATCATGTTGTCAGCACATAGTGATACAAGGCTTGTGATGAAGGGTGTTACCCATGGTGCATGTGACTATTTACTGAAACCTGTTAGATTGGAAGAGCTTAAGAACATATGGCAGCATGTGGTTCGAAGAAAGAAGTCTGAGAACAAGGATAAGAATAAGATTTCTATAGTGGAGAAGGAAAAAGATGTAATTGGGGATGGAAATCCTGGCACCAGTTCTGAAAATAATTCTGATCAAAGCAAAATGCTGGGTAAAAGGAGGAAGGACGAAGGTGAGGAAGATGAAGATGATGGTGAAGACAATGTACAAGATAACGAGGATGACCCATCTACACAGAAGAAGCCGCGTGTAGTTTGGGTAGTTGAGTTGCATAGGAAATTTGTTGCTGCAGTGGATCAACTGGGGCTTGAAAAGGCTGTTCCCAAGAAAATTCTTGACCTAATGAACGTTGAAGGGCTAACAAGGGAAAATGTGGCAAGTCACCTACAGAAATATAGGATCTATCTTAAAAAGGCAGCTGAACAAGCTAAAATTACTGCTGCATTGGGTGGTGAATCATCATACTTGCGAATGAGTCCACTAGAGGGATGTGGAGAGTTTCCTTCCTTGTCTGGTTCAGGTCGTCTTTCATCAACATTTGCATCTACTGGAATTTTTAGCAGATTGAACTCTCCAGCTGGCCTGAACTTGAGAGCAATAGGCTCTTCTGGACTGATCCAGCCTGGTCAGCCTCAAATAGCCACAAACACACTTGGAAATAATCAGTCATCATCTATCTTGTCTGCTAACTCTATATTTCAAAGCAATCCAACACCAATAGATCTTATTCAATCTCAACCAAGCAACTGTGCCACTGGTATTAGGCAGTTTAGTTCAATTGATGATTCAGGTGGTTTTGCAGTTGCTAGTGGATTCCTAGACAGTAAATCCACTGTTGGTGGTGCAAACATTTCATTTCCTTGTGTCTCAGGCAATCATTTGATATTACCAGGAAGCTCACAGCAATCTCAGAATGTGTCAGGATTTAGAAGTCAATCTTCTTTTGAAGCTGCTCCGTTTAACTCAGAAACTTCAGATATTTGTGGTTCCACTTTGTTGGACTATACACGGTGCAGCGATACCTGGCAGGGCGCCGTTCAGTTATCCAAATTTCCCTCTAATTCTTTGCCATTGAACGAGACTTTCACTAATGATCAGCTACCTTCTAACGGTTTAAATGTTTCTTCCTCCAATGCTTGCATCGGTAACAACACAGTTGATTTTTCTTCTGCTGTTCCACTGGAGGATCTTAGAGGTGAAATACAATGTCAAGAAGGCCTAATTGAGAATGTGGTTCAGTCTTCGCGTTACTCGTTGAGGCAGAACTGGGATCTACATAAGCAGGATTACAACCAAAACATGAGCTGCAACTTCAATGCTTTGAATTCACTGGTTTCTTCTGATGGAATTACAAGTAACATGGGGCAGAGTTTAAATCAATACAATGCGGCTACCCCATCATTCTGTCAGCTTAACGAGGATGAGAGGTTCACTTCAGATGTGAGATTTAAATCTCCTGATGCATTCCAGGATGGTTTCATTCGAAATATTGGATATTTGGATGACATAATGGGTTCAATGGTTAAAAGGGTATGA 1932 0.4172 MTLADQRCDLGNDNGAAKKFPFGMSVLAVDDDPICLKVLETLLVKCEYQVTTTNQAVKALKLLRENRNKFDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSAHSDTRLVMKGVTHGACDYLLKPVRLEELKNIWQHVVRRKKSENKDKNKISIVEKEKDVIGDGNPGTSSENNSDQSKMLGKRRKDEGEEDEDDGEDNVQDNEDDPSTQKKPRVVWVVELHRKFVAAVDQLGLEKAVPKKILDLMNVEGLTRENVASHLQKYRIYLKKAAEQAKITAALGGESSYLRMSPLEGCGEFPSLSGSGRLSSTFASTGIFSRLNSPAGLNLRAIGSSGLIQPGQPQIATNTLGNNQSSSILSANSIFQSNPTPIDLIQSQPSNCATGIRQFSSIDDSGGFAVASGFLDSKSTVGGANISFPCVSGNHLILPGSSQQSQNVSGFRSQSSFEAAPFNSETSDICGSTLLDYTRCSDTWQGAVQLSKFPSNSLPLNETFTNDQLPSNGLNVSSSNACIGNNTVDFSSAVPLEDLRGEIQCQEGLIENVVQSSRYSLRQNWDLHKQDYNQNMSCNFNALNSLVSSDGITSNMGQSLNQYNAATPSFCQLNEDERFTSDVRFKSPDAFQDGFIRNIGYLDDIMGSMVKRV 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0992 643 FunFam Two-component response regulator 209 272 - -
Mibi13g0992 643 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 381 IPR045279 GO:0009736
Mibi13g0992 643 PIRSF RR_ARR_type-B 5 624 IPR017053 GO:0003677|GO:0003700|GO:0009736
Mibi13g0992 643 SUPERFAMILY CheY-like 23 148 IPR011006 -
Mibi13g0992 643 CDD REC_typeB_ARR-like 26 140 - -
Mibi13g0992 643 MobiDBLite consensus disorder prediction 147 212 - -
Mibi13g0992 643 SUPERFAMILY Homeodomain-like 210 270 IPR009057 -
Mibi13g0992 643 Pfam Myb-like DNA-binding domain 216 265 IPR001005 -
Mibi13g0992 643 SMART REC_2 24 136 IPR001789 GO:0000160
Mibi13g0992 643 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 210 269 IPR017930 -
Mibi13g0992 643 Pfam Response regulator receiver domain 26 134 IPR001789 GO:0000160
Mibi13g0992 643 MobiDBLite consensus disorder prediction 147 164 - -
Mibi13g0992 643 Gene3D - 24 160 - -
Mibi13g0992 643 Gene3D - 209 271 - -
Mibi13g0992 643 ProSiteProfiles Response regulatory domain profile. 25 140 IPR001789 GO:0000160
Mibi13g0992 643 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 213 266 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0992 Mibi-ChrMibi13 12623440 12626316 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0992 16 422 Response Regulator Gene Family AT2G25180 51.306 1.26e-116 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mibi13g0992 Response_reg 3.2e-24 CL0304