Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0982 ATGGAGATTTTTAAATGTTTCTACTTCAATCTCTTTCTTGCCACTTTTTGTGTTTCCTTCTTTGCAGTTTCAGCAAAAGACCCTTATTCTGATGCACTTCTGAGCCTGAAATCTGAACTTGAGGATGAAGAAGACAGTTTAAATGACTGGGTGGTGGGAAACTCAACTGGGAAATCCAATTCTTCTTATTGTTCTTGGTCTGGAATCAAGTGTGATAACAACTCAAAAATTGTAACCTCCATAGACTTGTCCATGAAGAAACTGGGAGGTGTAATGTCAGGGAAGCAATTCAGTGTCTTCACAAAGCTTGAATATCTCAACCTCAGCCATAATTTCTTCTCTGGGCAACTTCCCGTGGGAATTTTCAACCTCACCAGTCTAAGAAGCTTGGATATAAGCAGAAACAACTTTTCCGGTCACTTCCCAGGTGGGATTTCCAGCCTTAAAAACTTACTTGTACTTGATGCCTTTAGCAACAGCTTTTCAGGGCCATTGCCTGTTGAACTTTCTGAACTTGGAAATCTCAAGGTCCTTAATCTTGCTGGGAGTTACTTCAAAGGGCCAATCCCATCTGAATATGGTTCCTTTAGAAGCCTTGAGTTTCTTCATCTTGCAGGAAATCTTCTCTCTGGGAATCTACCTCCAGAATTGGGTAATCTCAAAACAGTAACCCACATGGAAATTGGCTACAATTCTTACCAGGGTTTTATTCCATCTGAGTTAGGTAACATGAGTGAACTTAGATATCTTGATATTGCTGGTGCAAATCTATCTGGACCAATACCGAATCAACTCTCCAATCTCACCAATTTGCAGGCACTTTATCTGTTCAGAAACCAGCTCACTGGATCAATTCCAAGTGAGTTTAGCAATATTAAGCCACTCTCAGAATTGGATCTTTCTGATAATTTCATTTCTGGGCCCATTCCTGAAAGCTTCTCAGAGTTGGAGAACCTGAGGTTGCTTGGTCTCATGTACAATGACATGAATGGCACTGTTCCTGAAGGCATAGCACAGCTTGCAAACTTGGAAACTCTTCTTATTTGGAACAATGACTTCTCTGGGTCACTTCCAAAGAGCTTGGGCAAGAACTCAAATCTCATGTGGGTTGATGTTTCTACAAACAATTTTGTAGGCAGTATACCACCAGATATTTGTGTGAGAGGAGTACTATATAAGCTGATTCTGTTTTCAAACAAATTTTCTGGCAGCCTCTCACCATCTCTCTCAAATTGTTCATCACTCGTTCGTCTTCGCTTGGAAGATAACTTGTTCACAGGGAATATCCCTTTGAAATTCAGACATCTTCCTGACATATCATATGTTGACCTATCCAGGAATAACTTTCTTGGTAGGATCCCCTCAGATATTTCCCAAGCCACCAAGCTTACCTACTTCAATGTCTCTAATAATCCACTGTTAGGAGGCACCATACCTGCACAAACATGGTCTTTGCCAGTCCTGCAAAATTTTTCAGCCTCTTCATGTGGTATTTCAGGAAATCTTCCACCATTTGAGTCCTGCAAATCAGTCTCTAGCATTGACCTTGATAGGAACAACTTGTTTGGAACGATCTCATTCACTATTTCAAATTGCAAAAATCTTGAGATCATAAAATTATCCAACAATAATTTATCTGGTCCTATACCTGAAGAACTTGCAAGCATCCCTGTCCTTGGGGTAGTAGACCTGTCACACAATAACATCAGTGGCCCTATACCTGAAAATTTTAGTGCTTCTTCAAGCTTACAACTTCTTAATGTGTCTTTCAACTACATCTCCGGTTCGATTCCCAATGGGAAGCTATTCAAATTCATGGATAACAGTGCATTTGTTGGGAATCCAGAGCTATGTGGAGCACCTCTACGACCATGTTCTGATTCAGTTGGAATATTGGGAAGTAAAGGCACATGGAAGCTTACAAGTGTAGTGCTATTGTGTGCAGGATTGCTCATATTCCTTGTTGCAGCATTAGCTTTTGGAATAGTTTATTTCAAGCGAGGAGTTAAAAGCCAATGGAAGATGGTCTCATTTGTTGGGCTCCCTCAATTCACAGCAAATGATGTTTTGACAAGCTTCAACACCAAAGAATCAAGAGGAGTGGCAGAAAAACCATCACCCTCACCAGTTTTTTCAAGAGCTGTTCTGCCAACTGGAATAACAGTTTTGGTGAAGAAGATTGAGTGGGAAAAGAGGAACATTAAAGTGGTGTCTGAGTTTATAATGAGATTAGGAAATGCAAGGCACAAGAATTTGATCAGATTACTTGGGTTTTGCTACAACCAGAATCTAGCTTATATTTTATATGATTACTTACCCAATGGGAACTTGGCAGAGAAACTTGGGATGAAAAGGGATTGGGAAGCTAAATTCAGAATTGTGATTGGCATTGCCAAGGGACTTTGCTTCCTTCACCATCACTGTTACCCAGCCATACCCCATGGAGACTTGAAGTCTAGCAATGTAGTATTTGATGAAAATATGGAACCTCACTTGGCAGAATTTGGCCTCAAGCATGTGTCGAAAGTGAGCAAAGATTCATCTCCTTCTTCAACTTCTAGCTGGGAACCAGAATACAATGAAGCCATGAAAGAGGAATTCTATGCTGATGTCTACAAATTTGGAGAGATGATTCTGGAGATTTTAACTAATGGAAGGCTGAAAAATGCAGCAGCCAGCATAAACAACAAGCCAAGAGAAGTTCTTTTGAGAGAAATATATGATGAAAATGATCTAAGTGCTGCCAGTTCAATGCAAGAGATCAAACAGGTTCTTGAAGTGGCCTTACTTTGCACCAGAAGCAAGTCATCTGATCGCCCATCCATGGAAGATGCCTTGAAGCTTTTGTCAGGTTCAAATCCTCCGGATCTAGAAGATCATAAATATTAA 2889 0.4036 MEIFKCFYFNLFLATFCVSFFAVSAKDPYSDALLSLKSELEDEEDSLNDWVVGNSTGKSNSSYCSWSGIKCDNNSKIVTSIDLSMKKLGGVMSGKQFSVFTKLEYLNLSHNFFSGQLPVGIFNLTSLRSLDISRNNFSGHFPGGISSLKNLLVLDAFSNSFSGPLPVELSELGNLKVLNLAGSYFKGPIPSEYGSFRSLEFLHLAGNLLSGNLPPELGNLKTVTHMEIGYNSYQGFIPSELGNMSELRYLDIAGANLSGPIPNQLSNLTNLQALYLFRNQLTGSIPSEFSNIKPLSELDLSDNFISGPIPESFSELENLRLLGLMYNDMNGTVPEGIAQLANLETLLIWNNDFSGSLPKSLGKNSNLMWVDVSTNNFVGSIPPDICVRGVLYKLILFSNKFSGSLSPSLSNCSSLVRLRLEDNLFTGNIPLKFRHLPDISYVDLSRNNFLGRIPSDISQATKLTYFNVSNNPLLGGTIPAQTWSLPVLQNFSASSCGISGNLPPFESCKSVSSIDLDRNNLFGTISFTISNCKNLEIIKLSNNNLSGPIPEELASIPVLGVVDLSHNNISGPIPENFSASSSLQLLNVSFNYISGSIPNGKLFKFMDNSAFVGNPELCGAPLRPCSDSVGILGSKGTWKLTSVVLLCAGLLIFLVAALAFGIVYFKRGVKSQWKMVSFVGLPQFTANDVLTSFNTKESRGVAEKPSPSPVFSRAVLPTGITVLVKKIEWEKRNIKVVSEFIMRLGNARHKNLIRLLGFCYNQNLAYILYDYLPNGNLAEKLGMKRDWEAKFRIVIGIAKGLCFLHHHCYPAIPHGDLKSSNVVFDENMEPHLAEFGLKHVSKVSKDSSPSSTSSWEPEYNEAMKEEFYADVYKFGEMILEILTNGRLKNAAASINNKPREVLLREIYDENDLSAASSMQEIKQVLEVALLCTRSKSSDRPSMEDALKLLSGSNPPDLEDHKY 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0982 962 Pfam Protein tyrosine and serine/threonine kinase 719 947 IPR001245 GO:0004672|GO:0006468
Mibi13g0982 962 Gene3D Ribonuclease Inhibitor 29 186 IPR032675 -
Mibi13g0982 962 Gene3D Transferase(Phosphotransferase) domain 1 771 957 - -
Mibi13g0982 962 SUPERFAMILY RNI-like 80 402 - -
Mibi13g0982 962 SUPERFAMILY Protein kinase-like (PK-like) 713 949 IPR011009 -
Mibi13g0982 962 SUPERFAMILY RNI-like 309 599 - -
Mibi13g0982 962 Pfam Leucine rich repeat N-terminal domain 31 72 IPR013210 -
Mibi13g0982 962 ProSitePatterns Serine/Threonine protein kinases active-site signature. 812 824 IPR008271 GO:0004672|GO:0006468
Mibi13g0982 962 FunFam Leucine-rich repeat receptor-like protein kinase TDR 772 955 - -
Mibi13g0982 962 PANTHER UNNAMED PRODUCT 100 180 - -
Mibi13g0982 962 FunFam Leucine-rich repeat receptor-like protein kinase TDR 684 771 - -
Mibi13g0982 962 FunFam Leucine-rich repeat receptor-like protein kinase TDR 313 627 - -
Mibi13g0982 962 Gene3D Ribonuclease Inhibitor 390 629 IPR032675 -
Mibi13g0982 962 FunFam Leucine-rich repeat receptor-like protein kinase TDR 191 294 - -
Mibi13g0982 962 SMART LRR_typ_2 196 220 IPR003591 -
Mibi13g0982 962 SMART LRR_typ_2 100 124 IPR003591 -
Mibi13g0982 962 SMART LRR_typ_2 340 364 IPR003591 -
Mibi13g0982 962 SMART LRR_typ_2 268 291 IPR003591 -
Mibi13g0982 962 Gene3D Ribonuclease Inhibitor 285 389 IPR032675 -
Mibi13g0982 962 ProSiteProfiles Protein kinase domain profile. 649 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0982 962 Pfam Leucine rich repeat 510 569 IPR001611 GO:0005515
Mibi13g0982 962 Pfam Leucine rich repeat 269 328 IPR001611 GO:0005515
Mibi13g0982 962 Pfam Leucine Rich Repeat 102 118 IPR001611 GO:0005515
Mibi13g0982 962 Gene3D Ribonuclease Inhibitor 187 284 IPR032675 -
Mibi13g0982 962 Gene3D Phosphorylase Kinase; domain 1 670 770 - -
Mibi13g0982 962 MobiDBLite consensus disorder prediction 935 962 - -
Mibi13g0982 962 SMART serkin_6 684 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0982 962 FunFam Leucine-rich repeat receptor-like protein kinase 26 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0982 Mibi-ChrMibi13 12518895 12522229 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0982 6 950 Receptor kinase-like Gene Family AT5G51350 55.381 0.0 981
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi13g0982 PK_Tyr_Ser-Thr 2.3e-22 CL0016