Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0979 ATGTATATTTATACACATCAAGTGTTTACTCAATTAATGCAACTTTGTTGGGACTTATTCAATGGCTGTAATTGCACCAACACTAATATCTTCTTTCAAAAGGGAACTTTCTCCTTCAGAAGAGAATTTGTGGATATGGCAGGAGGGTCTTTTGCAGGAGGTGTGACCAAAGAGAGAGCAAATCAATACAAAGGAAAAGTCACCCCTTATGTGGTCATTGCTTGCATTGTTGCTGCCACTGGTGGCTCCCTTTTTGGCTATGATATTGGAATCTCAGGTGGGGTTACTTCAATGGATGATTTCCTTAAGGATTTCTTCCCCACAGTGTACAGACACAAGAGTCATGCACAAGAGAACAACTATTGCAAGTACAACAATCAAGGCCTTGCTGCTTTCACCTCTTCTCTTTACCTTGCTGGTTTAGTTGCTTCTCTCATGGCTTCTCCGGTCACCAGAAAGTACGGCCGGCGAGCCAGTATAATCGCCGGCGGTGTCAGCTTCCTCATTGGATCAGCCCTCAATGCCTCAGCTGTTAATCTCGCAATGCTTCTCTTAGGTAGAATTATGCTTGGTGTTGGTATTGGATTCGGAAATCAGGCGATTCCTCTGTATTTGTCGGAGATGGCACCTACCCACCTACGAGGAGGACTGAACATGATGTTTCAAGTAGCGACAACATTTGGGATTTTCACAGCAAACATGGTAAACTATGGAACACAGAAAATCACGCCATGGGGATGGAGATTATCCCTAGGTTTAGCAGGAGTGCCAGCTCTGTTAATGACAGTAGGAGGAATATTCCTCCCTGACACTCCAAACAGCTTAATAGAAAGAGGATTAAGAGACAAAGGAAGAAAGCTGCTTGAAAAAATCAGAGGAACAAAAGATGTAGAAGCAGAGTTTCAAGACATGGTTGAAGCAAGTGAATTTGCAGAATCAGTGAAACACCCTTATAGGAATATACTTGAAAAAAGGTATAGGCCAGAGTTGGTGATGGCCATTTTTATGCCGGCGTTTCAGATTCTGACAGGAATAAATACCATTCTGTTCTATGCTCCGGTGTTGTTTCAGAGCATGGGGTTCGCCGGAGACGCCTCGTTGTACTCGTCGGCGACCACCGGAGGAGTTCTTGCTTTCTCCACGTTCATTTCAATTGCCACAGTCGATCGATTGGGAAGAAGACCTTTGCTTATCAGTGGTGGATTTCAGATGATTACATGTCAGATAATTGTGGCCATAATCCTGGGGATCAAGTTTGGAAACTACCAACATCTTTCCAAAATCTATTCAATATGGGTGGTGGTAGTTATATGTCTATTTGTGTTAGCTTTTGGATGGTCATGGGGCCCACTTGGGTGGACAGTGCCAAGTGAGATATTTCCATTAGAGATCAGATCAGCAGGCCAAAGCATAACAGTTGCTGTTAATCTTCTCTTCACATTCATAGTTGCTCAAGCCTTTCTTTCCATGCTTTGTGCTATGAGGTTTGGAATGTTTCTCTTCTTTTCTGGTTGGATCACATTAATGACTCTATTTGTTTTCCTCTTCTTGCCTGAAACCAAGGGAATCCCCATTGAAGAGATGTCACTCATGTGGAGAAGACACTGGTTCTGGAAAAAGATTCTCCCTACAGAATTAGAAACTCAAGCTTATGGATCCCAAGATGCTAAAATTAAAACTTCCATGGATGCATCATTTGATAATAATGCAGCTTGA 1716 0.4272 MYIYTHQVFTQLMQLCWDLFNGCNCTNTNIFFQKGTFSFRREFVDMAGGSFAGGVTKERANQYKGKVTPYVVIACIVAATGGSLFGYDIGISGGVTSMDDFLKDFFPTVYRHKSHAQENNYCKYNNQGLAAFTSSLYLAGLVASLMASPVTRKYGRRASIIAGGVSFLIGSALNASAVNLAMLLLGRIMLGVGIGFGNQAIPLYLSEMAPTHLRGGLNMMFQVATTFGIFTANMVNYGTQKITPWGWRLSLGLAGVPALLMTVGGIFLPDTPNSLIERGLRDKGRKLLEKIRGTKDVEAEFQDMVEASEFAESVKHPYRNILEKRYRPELVMAIFMPAFQILTGINTILFYAPVLFQSMGFAGDASLYSSATTGGVLAFSTFISIATVDRLGRRPLLISGGFQMITCQIIVAIILGIKFGNYQHLSKIYSIWVVVVICLFVLAFGWSWGPLGWTVPSEIFPLEIRSAGQSITVAVNLLFTFIVAQAFLSMLCAMRFGMFLFFSGWITLMTLFVFLFLPETKGIPIEEMSLMWRRHWFWKKILPTELETQAYGSQDAKIKTSMDASFDNNAA 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0979 571 ProSitePatterns Sugar transport proteins signature 2. 189 214 IPR005829 GO:0016020|GO:0022857|GO:0055085
Mibi13g0979 571 PRINTS Sugar transporter signature 82 92 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mibi13g0979 571 PRINTS Sugar transporter signature 184 203 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mibi13g0979 571 PRINTS Sugar transporter signature 340 350 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mibi13g0979 571 PRINTS Sugar transporter signature 434 455 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mibi13g0979 571 PRINTS Sugar transporter signature 457 469 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mibi13g0979 571 TIGRFAM SP: MFS transporter, sugar porter (SP) family 63 528 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mibi13g0979 571 CDD MFS_STP 77 519 IPR044778 GO:0015145|GO:0015749
Mibi13g0979 571 Pfam Sugar (and other) transporter 75 532 IPR005828 GO:0016020|GO:0022857|GO:0055085
Mibi13g0979 571 ProSitePatterns Sugar transport proteins signature 1. 384 401 IPR005829 GO:0016020|GO:0022857|GO:0055085
Mibi13g0979 571 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 60 541 IPR045262 GO:0015144
Mibi13g0979 571 ProSiteProfiles Major facilitator superfamily (MFS) profile. 74 521 IPR020846 GO:0022857
Mibi13g0979 571 SUPERFAMILY MFS general substrate transporter 66 528 IPR036259 -
Mibi13g0979 571 FunFam Sugar transport protein 13 64 535 - -
Mibi13g0979 571 Gene3D MFS general substrate transporter like domains 63 535 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0979 Mibi-ChrMibi13 12437876 12442431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0979 46 550 Organic Solute Cotransporters AT4G02050 76.378 0.0 822