Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0970 ATGGCTGGAAATCTTCCTGGTGTTGAGTGTGCTCGAAGAAGAAGGTTTCATCAGAGTGGTGTATCGTCTGATTCGCCTTCCTCCATGGTTCCTCATACTTTTACTAGACGCTCTTCTTTCTGCTTGTACACTAGCAACCATGAATATCTTTCTTCTTCCTCTTTACTGCAAAGAAGCTTGATAAACCAGGCATACCCACAAGAAATGCTAGGAGGTGTAGCTGGAGAAGCCAAACAGAGATTGGATGAGAGATTAGGAACACAGAGGAAAACAGAAATCAAAAGTAAGCAGAAGAACAAAGAGAAGGAAAGGAGTGAAGCAGAGTTGCAGACAGAGATATATGGGGCAAAGAAAAATGGAAGCAGAAGATTCAGTTGGAGCAAATTGAGCTGGAAGGCAACAGAACAAGAGGAATGTGCAGTGTGCTTAGAATCATTCAAAAATGGTGAGACGCTCATAAACCTTCCATGTGCACACAAGTTCCATTCAAGGTGTTTGGAGCCATGGCTACAGAATAATTCTCACTGTCCTTGTTGCAGAACCATCATCATCATTTCGCAGTAG 564 0.4273 MAGNLPGVECARRRRFHQSGVSSDSPSSMVPHTFTRRSSFCLYTSNHEYLSSSSLLQRSLINQAYPQEMLGGVAGEAKQRLDERLGTQRKTEIKSKQKNKEKERSEAELQTEIYGAKKNGSRRFSWSKLSWKATEQEECAVCLESFKNGETLINLPCAHKFHSRCLEPWLQNNSHCPCCRTIIIISQ 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0970 187 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 119 184 IPR013083 -
Mibi13g0970 187 ProSiteProfiles Zinc finger RING-type profile. 139 180 IPR001841 -
Mibi13g0970 187 Coils Coil 90 110 - -
Mibi13g0970 187 FunFam Zinc finger family protein 113 185 - -
Mibi13g0970 187 CDD RING-H2_PA-TM-RING 138 180 - -
Mibi13g0970 187 SMART ring_2 139 179 IPR001841 -
Mibi13g0970 187 SUPERFAMILY RING/U-box 126 185 - -
Mibi13g0970 187 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 52 181 - -
Mibi13g0970 187 Pfam Ring finger domain 138 180 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0970 Mibi-ChrMibi13 12361270 12362259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0970 1 85 C3H Transcription Factor Family AT2G15580 48.936 8.20e-20 78.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi13g0970 13 12361270 12362259 Mibi13g0970 13 12361270 12362259 ECH