Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0968 ATGGGTTCGACCAATAGTAGACTTGGGTCTCGCCCTTCCACTTCCACCTCCCGAGTCAATGGCGCTAACCGCTTCCGATTCTCCTCCCTTCTCTGTGGTGACTCTTCCCTCCGTTCTACTTATCAGATGGAAGATCAACCAACTGAACTTCAGAGAGATTTGGCGACAGAATCTAATGATGAAAATCAGAAAGTTGTTGAGGCATCACCAATTTCATGTACAGAAGCTAGAATTGGTTGCTGCCCCCATACTGAAACTGCGAGCTCATCGGATACTAGAACTGAGTTGGGTGAGATTTCTACTGTTGAATGTTCCCCGAGAAGTGTTTCAACTAGTTGTCCAACGAAGTACTTGTCTGAAAGTAAGGAGCTACTTCCTCCTCATCAGGTAAGTTCAGATCATAGTTATGATGAATCTTATAGGGATAGTAGCAACACAGCTAGTACTTCATTTGTAGAACAGCAGTCTTCAGATCCAGTCTCTGTAAATGTTTCTGCTAACAAAGATGCAGTCAATGATATTGATGGTTCAGTGGATAGTGGTGTTTCTCAAATATCTCGCGGGTCATTGTATCCAAGGATATCAACCTCTCAGGAGCAAGGAGATCCCATTGCTGATAATATTTCTATTGAGAATCACGCTCATTCAGCTGTACCTATCCATAATTCTGAATTGGATCGTGTTGCCCAAGTCTCCAATTTACCTGCAACTTCTGAGTTGCCTGATGACGAAACCCGCCAGGAGACAGTACCTTCAGGTTTAGGTTTTCTTGTGTCCAATAGGGAAAGAGGACATGGAAATGACAGTATGTTTCAAGTTGATGTTGTCGCAATATCTTCCAATGTTTTGTCTGGTGGCAATGCCGATGTTAGTGATCGTGATGCTAGAAGGGATAGTAGAAGACTATTTTGGGATGCTATTTCAAGACGTAGTTCCAGAAGATTTGGTGATTCTCGAACCTTTGTCTTCTCAGCTGGTGATGTGGATGATCCAAGTTCTCAAGATCAATGGCTTCTTGATTTGAGTAATAATTCCCCAAATGATTGGGTTGGAGATGATTCTGGATATTTAGGCAGTAGAATTCATAGATTGAACGAGCGGATGAGGCACTCAAGATCTGAGATCTGGGAAAGACTTCGTGGTGGCCTTGATGAGATTGGTCGCTTGAACCCTTCTTGTCCATTAGGACTTCATCCTGATGGCATGTGTTCATGTGAATCTTTACAGATGGCTGAGGAGTCCAGTACTCGTGCAAGTATATCAAGAATAGCTATGCTTGCTGAAGCTCTCTTTGAGGTTCTGGATGAAATCCATCGCCAACCTGTATCACTTGCACTGTCCATGGTCTCTCTTCCAGCACCTGAATCGATTGTAGACTCTTTCCCTCTTAAGTGTCACAAAAAGATTGACACAGCTGATAATGGCAATGATGCTGAACAATGTTACATATGCTTGGCTGAGTATGAGGAAGGAGATAATATACGCGTTCTTCCATGCAACCATGAATACCACATGTCATGTGTTGATAAGTGGCTTAAAGAAATACATGGTGTATGCCCTCTTTGTCGTGGGAATGTTTGCGGAGGAGGGTTCACCGAATCTTCTGCCTCTAACGCAGAAGTACCATCTCAATGA 1635 0.4324 MGSTNSRLGSRPSTSTSRVNGANRFRFSSLLCGDSSLRSTYQMEDQPTELQRDLATESNDENQKVVEASPISCTEARIGCCPHTETASSSDTRTELGEISTVECSPRSVSTSCPTKYLSESKELLPPHQVSSDHSYDESYRDSSNTASTSFVEQQSSDPVSVNVSANKDAVNDIDGSVDSGVSQISRGSLYPRISTSQEQGDPIADNISIENHAHSAVPIHNSELDRVAQVSNLPATSELPDDETRQETVPSGLGFLVSNRERGHGNDSMFQVDVVAISSNVLSGGNADVSDRDARRDSRRLFWDAISRRSSRRFGDSRTFVFSAGDVDDPSSQDQWLLDLSNNSPNDWVGDDSGYLGSRIHRLNERMRHSRSEIWERLRGGLDEIGRLNPSCPLGLHPDGMCSCESLQMAEESSTRASISRIAMLAEALFEVLDEIHRQPVSLALSMVSLPAPESIVDSFPLKCHKKIDTADNGNDAEQCYICLAEYEEGDNIRVLPCNHEYHMSCVDKWLKEIHGVCPLCRGNVCGGGFTESSASNAEVPSQ 544
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0968 544 PANTHER RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED 1 543 - -
Mibi13g0968 544 MobiDBLite consensus disorder prediction 42 63 - -
Mibi13g0968 544 MobiDBLite consensus disorder prediction 141 162 - -
Mibi13g0968 544 SUPERFAMILY RING/U-box 466 526 - -
Mibi13g0968 544 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 458 528 IPR013083 -
Mibi13g0968 544 MobiDBLite consensus disorder prediction 1 21 - -
Mibi13g0968 544 CDD RING-H2_PA-TM-RING 480 523 - -
Mibi13g0968 544 FunFam Putative RING zinc finger domain superfamily protein 448 528 - -
Mibi13g0968 544 ProSiteProfiles Zinc finger RING-type profile. 481 523 IPR001841 -
Mibi13g0968 544 Pfam Ring finger domain 480 523 IPR001841 -
Mibi13g0968 544 MobiDBLite consensus disorder prediction 120 162 - -
Mibi13g0968 544 SMART ring_2 481 522 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mibi13g0968 Mibi-ChrMibi13 12349820 12353323 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0968 392 527 C3H Transcription Factor Family AT5G45290 52.318 3.77e-41 154