Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0961 ATGTGTTTACAGGATTCCGAGCAAGTTGGTGATAATATGGAGAACCCAGATGATAGAAGGATGTCTTGGCCTTTGCATTGTGATATCTTGCATACCCACATGGAAAAGGAGCCTCCTTTTATAACCTCCGAGGATCGGAGTTTCTGTTTTGGGAATTCATTTCCGCTGGAAAGCATAAGTGAGGACACAGTGATTGCAGACAAAAAACAGAACCAGATGAAATTTGCCCCTACCTTGCGATCTGGAGAGTGGTCCGATATCGGTGGTCGCCCTTATATGGAAGATACTCACATTTGTATTGGAGACTTAGGAAAGAAGTTTGGTTATGATGTGCTCAGTGAGGAAGTTTTTTCCTTTTATGGGGTATTTGACGGACACGGAGGGAAGAGTGCTGCAGTATTTGTCCGTGATCATCTTCCAAGAGTTATTATTGAGGATGCTGATTTTCCTGTGGAGCTAGAAAAGGTGGTCACAAGGTCATTTCTACAGACAGATGCTGCCTTTGCTGAGACATGCTCCCTTGAGTCTTCATTGTCTTCTGGTACAACTGCATTAACTGCAATTATTTTTGGGAGGTCTTTGCTAGTGGCCAATGCTGGAGATTGCAGGGCTGTATTGTCCAGACGTGGGAGAGCTATAGAAATGTCAAAAGATCATAGGCCCTTGTGTATGAAAGAGAGGAAGCGAGTTGAGTCTCTGGGTGGATTCATCGATGATGGTTATCTAAATGGCCAAATAGGCGTGACACGGGCGCTAGGCGACTGGCATCTCGAGGGCTTGAAGGAAATGAGTGAAAGAGGAGGACCCTTAAGTGCTGAGCCAGAACTCAAACTTACCACACTGACCAAAGAGGATGAGTTTTTAATGATTGGAAGTGATGGGATTTGGGATGTTTTCAGCAGCCAAAATGCTATAGATTTTGCAAGAAGGAGGCTTCAAGAGCATAATGATGTGAAACTATGCTGTAAGGAGATAGTGGAGGAAGCCATGAAGAGAGACTCAACAGATAACTTAACTGTTGTGATGGTGTGCTTTCACTCAGAACCACCACCACCTGTGGTGGTAGAGAGGCCGAGATTCAGAAGAAGCATATCTGCTGAGGGACTTCAGAACATCAAGTCCCTCTTGGAAGGATAG 1137 0.4477 MCLQDSEQVGDNMENPDDRRMSWPLHCDILHTHMEKEPPFITSEDRSFCFGNSFPLESISEDTVIADKKQNQMKFAPTLRSGEWSDIGGRPYMEDTHICIGDLGKKFGYDVLSEEVFSFYGVFDGHGGKSAAVFVRDHLPRVIIEDADFPVELEKVVTRSFLQTDAAFAETCSLESSLSSGTTALTAIIFGRSLLVANAGDCRAVLSRRGRAIEMSKDHRPLCMKERKRVESLGGFIDDGYLNGQIGVTRALGDWHLEGLKEMSERGGPLSAEPELKLTTLTKEDEFLMIGSDGIWDVFSSQNAIDFARRRLQEHNDVKLCCKEIVEEAMKRDSTDNLTVVMVCFHSEPPPPVVVERPRFRRSISAEGLQNIKSLLEG 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0961 378 Gene3D - 61 349 IPR036457 -
Mibi13g0961 378 ProSiteProfiles PPM-type phosphatase domain profile. 80 345 IPR001932 -
Mibi13g0961 378 SMART PP2C_4 70 343 IPR001932 -
Mibi13g0961 378 CDD PP2Cc 80 345 IPR001932 -
Mibi13g0961 378 Pfam Protein phosphatase 2C 92 337 IPR001932 -
Mibi13g0961 378 PANTHER PROTEIN PHOSPHATASE 2C 67 343 IPR015655 GO:0004722|GO:0006470
Mibi13g0961 378 FunFam Probable protein phosphatase 2C 22 64 348 - -
Mibi13g0961 378 ProSitePatterns PPM-type phosphatase domain signature. 119 127 IPR000222 GO:0043169
Mibi13g0961 378 SUPERFAMILY PP2C-like 73 347 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0961 Mibi-ChrMibi13 12288847 12292078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0961 69 378 PP2C-type Phosphatase Gene Family AT2G25620 60.191 7.79e-138 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Mibi13g0961 PP2C 7.3e-64 CL0238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi13g0961 13 12288847 12292078 Mibi13g0961 13 12288847 12292078 ECH