Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0960 ATGACTTTGTCCAGATGTAGGCAATCTTTAGGAAGTTTATGTTTCTTGATTGTGATGCCATCTTGTACAATATTGGGCATTGGATACGAGCTTCTTATTATTTTCCTTGAAAGCAATGGAATGGTTTTTGTTTGGGACATAACTTCTCTCGTCTTCCTCGTTCAGCCTCAGCCGTCACTCCCTTCAACACAGAGAGATAGCGCCCCTGCAATCATGGCTGAGCAAACTGAGAAGGCCTTTCTGAAGCAACCTAAAGTGTTTCTTAGCTCCAAGAAATCTGGGAAGGGAAAGAGGCCTGGAAAAGGTGGTAATCGCTTCTGGAAATCTATTGGTCTTGGATTCAAGACCCCCAGAGAGGCCATTGAAGGAACCTATATTGATAAGAAGTGCCCCTTCACTGGTAATGTTTCTATCCGAGGTCGTATTATATCTGGCACATGCCACAGTGCTAAGATGTCAAGGACTATTATTGTTCGGAGGAATTATCTTCATTTTGTCAAGAAGTATCAGAGATATGAGAAGAGGCATTCAAATATAGCTGCTCATATATCACCCTGCTTTCGCGTGAGGGAAGGGGATCATGTCACCGTTGGCCAATGCAGGCCGCTCTCAAAGACCGTGAGGTTTAATGTGTTGAAGGTGATCCCTGCTGGATCTTCTGGTGGCGTGAAAAAGGCGTTCACTGGAGCTTGA 693 0.4459 MTLSRCRQSLGSLCFLIVMPSCTILGIGYELLIIFLESNGMVFVWDITSLVFLVQPQPSLPSTQRDSAPAIMAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRIISGTCHSAKMSRTIIVRRNYLHFVKKYQRYEKRHSNIAAHISPCFRVREGDHVTVGQCRPLSKTVRFNVLKVIPAGSSGGVKKAFTGA 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0960 230 Pfam Ribosomal_S17 N-terminal 75 143 IPR032440 -
Mibi13g0960 230 TIGRFAM uS17_arch: ribosomal protein uS17 125 214 IPR028333 -
Mibi13g0960 230 Pfam Ribosomal protein S17 145 213 IPR000266 GO:0003735|GO:0005840|GO:0006412
Mibi13g0960 230 FunFam 40S ribosomal protein S11 72 229 - -
Mibi13g0960 230 PRINTS Ribosomal protein S17 family signature 159 182 IPR000266 GO:0003735|GO:0005840|GO:0006412
Mibi13g0960 230 PRINTS Ribosomal protein S17 family signature 202 209 IPR000266 GO:0003735|GO:0005840|GO:0006412
Mibi13g0960 230 PRINTS Ribosomal protein S17 family signature 192 202 IPR000266 GO:0003735|GO:0005840|GO:0006412
Mibi13g0960 230 Gene3D - 61 229 - -
Mibi13g0960 230 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 81 220 IPR000266 GO:0003735|GO:0005840|GO:0006412
Mibi13g0960 230 ProSitePatterns Ribosomal protein S17 signature. 192 204 IPR019979 GO:0003735|GO:0005840|GO:0006412
Mibi13g0960 230 SUPERFAMILY Nucleic acid-binding proteins 139 218 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0960 Mibi-ChrMibi13 12274117 12279959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0960 72 229 Cytoplasmic Ribosomal Protein Gene Family AT5G23740 88.608 8.87e-94 270