Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0959 ATGGCAAGTGATGGTACTGAAAAGATCCCTATCAAAAATGAGACTGAAGGTTCAGAAGCTGCCATTGAGATAAAGATTAAAACATTGGACTCACAAATTTATACTCTCAAAGTGGATAAACAGATGCCAGTTCCTGCTCTGAAGGAACAGATTGCTTCTGTTACTGGAGTGTTATCAGAGCGGCAGCGCTTAATTTGTCGAGGAAAAGTGCTGAAGGATGATCAACTGCTTTCTGCCTACCATGTTGAGGATGGCCACACCTTGCATCTGGTTGTGAGGCAGCCTGATCTGCCTGGAAGTTTTCCCAATCTATCTGCTGACCCACATTCAAGCACAAACAATAGTCACAGTACTCAAATAGCTCCTGGAGTTTTTATTGAAACTTTTAATGTGCCTGTTCAGGGAGATGGAGTTCCTCCAGAAGTTAATAGGATTATTTCTGCTATTCTAGGATCTATTGGAATTTCAAATTTTCCAAGTGGCAGTGAAGGGATTGATGTCAGGGGACATGATTCCCGAGGGCTTGGGAGAACATCAGGTTCTGGCGGTATATCAGATTCATTTCACCCTCAACCTGAACAAGCTGGTTTGCGGAATTCATCTGATAGATCTCGCAATACATTTGGACTTCCAACAGCAGCTTCTTCTTTGGGATCATTACAACCTCCTGTCATTCCCGATTCTTTGTCAACTTTGTCTCAGTACGTGAGTCATCTAAGGCATGAATTTGAAGCCATTGTGAGAGAAGGGGGGAATAGTACCCAAGCTGCGGAGGCTTATGGGAATGAAGCATCAGTTTCTTCCTCACCTTCAGGTTCTGCACCAGAAGGGCTTTTGTCACCTGCATACTTGGCGGAAGTTTTGCATTCTACCAGACGGATGTTCAGTGAACAAGCTAATGAGTGCTTGTTTCAACTTGCAACACAGCTCGAGAATCAGGCAAATGTAACTGATCCCTTGTTGCGGTTAAACACTCAATCGAGGGCTTGGAGGACTGGAGTTCTGTTTTACAATCTTGGTGCATTTTTACTTGAGCTTGGTCGTACAACCATGGCATTGCGTTTGGGTCAAACACCGTCTGAAGCTGTAGCTAATGGTGGACCAGCAGTTTTTATATCCTCATCTGGTCCTAACCATATCATGGTTCAGCCTCTTCCTTTTCAACCTGGAGTAAGCTTTGGTTCTGCCCCTGTTGGAGCTGTGCAGTCCCCCTCTGGTTTAGGTAGTGGACTTAGTTCAAGTTTTTACCCAAGGCGTATAGATATTCAGATACGGCGAGGTACATCAACATCCTCAGCTAATGTCAACAGAGAGGAACATGGGGATACACAATCTGCATCAGTACAAAGAAATCCTGTTGAAATTTCTGTTAATCAGACAAGCTCGAGACTTCCAGAGGATTTATCTTTTGGTGGGGAGTCAGGAGTACGGATAGTGCCCATTAGAACCATGGTTGCAGCGGTACCTAGCCAGTTAGGACGTAACCCTTCAGAATCTTCTGCTAATTCTTTAGGGCTTTACTATCCTGTTATTGGGAGATTTCAGCATGCACCTTCTGGACACGGTAATGGACACGGTAATAGTGAACCAGGATCTCAGCCTGCTAGTCAGCATCATGCATCTGGTGTTCATGTAGCGCAACAGTCAACACCTGAATCTACTGGGCAAAGGCAACGAATGGATGATCCTGCAAGAAATGGAACTTCATCGACTCCTAGCTTAAGACAAGAGCCATCTACTACCCGCCGGGTGAACATCAATATTCTGACGGCTGGTGGAATCCAGAGCAACCAAGAATCTGAGAGGCAGATACCCAGTAATGTGCTTCAGTTTATAAGAGCACTTTTTCCTGGTGGTGAAGTTCATGTTGAAGATCCTAGTCTACAGGGAACGACTGGTGGTCCTACTGCAGATCATTCTGGAACATCAACAGATGCTGCTCGTGTCCCCGAGCCAGAGCCTGGAGCTAGTGAGGAAGGAATATTTTTGTCTAATTTACTCCGTGAGGTCATGCCCCTCATATCACAAGCAGGTTCTGGGGCGCATGGAACTCCTCAAGGTGAAAATGCTTCAGACAATCAAACAGCTTCTGATTCTTCCACCCAGGGTGGGATGTCGCGCCGACAAAGTGATTCTGATCCTAGCCCTCCAAATTCTAAACGCCAAAAGACGGAGTGA 2178 0.455 MASDGTEKIPIKNETEGSEAAIEIKIKTLDSQIYTLKVDKQMPVPALKEQIASVTGVLSERQRLICRGKVLKDDQLLSAYHVEDGHTLHLVVRQPDLPGSFPNLSADPHSSTNNSHSTQIAPGVFIETFNVPVQGDGVPPEVNRIISAILGSIGISNFPSGSEGIDVRGHDSRGLGRTSGSGGISDSFHPQPEQAGLRNSSDRSRNTFGLPTAASSLGSLQPPVIPDSLSTLSQYVSHLRHEFEAIVREGGNSTQAAEAYGNEASVSSSPSGSAPEGLLSPAYLAEVLHSTRRMFSEQANECLFQLATQLENQANVTDPLLRLNTQSRAWRTGVLFYNLGAFLLELGRTTMALRLGQTPSEAVANGGPAVFISSSGPNHIMVQPLPFQPGVSFGSAPVGAVQSPSGLGSGLSSSFYPRRIDIQIRRGTSTSSANVNREEHGDTQSASVQRNPVEISVNQTSSRLPEDLSFGGESGVRIVPIRTMVAAVPSQLGRNPSESSANSLGLYYPVIGRFQHAPSGHGNGHGNSEPGSQPASQHHASGVHVAQQSTPESTGQRQRMDDPARNGTSSTPSLRQEPSTTRRVNINILTAGGIQSNQESERQIPSNVLQFIRALFPGGEVHVEDPSLQGTTGGPTADHSGTSTDAARVPEPEPGASEEGIFLSNLLREVMPLISQAGSGAHGTPQGENASDNQTASDSSTQGGMSRRQSDSDPSPPNSKRQKTE 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0959 725 MobiDBLite consensus disorder prediction 426 452 - -
Mibi13g0959 725 MobiDBLite consensus disorder prediction 521 583 - -
Mibi13g0959 725 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 11 723 - -
Mibi13g0959 725 MobiDBLite consensus disorder prediction 679 717 - -
Mibi13g0959 725 ProSiteProfiles Ubiquitin domain profile. 22 97 IPR000626 GO:0005515
Mibi13g0959 725 SUPERFAMILY Ubiquitin-like 17 98 IPR029071 -
Mibi13g0959 725 Gene3D - 15 111 - -
Mibi13g0959 725 MobiDBLite consensus disorder prediction 622 658 - -
Mibi13g0959 725 MobiDBLite consensus disorder prediction 516 583 - -
Mibi13g0959 725 FunFam Large proline-rich protein BAG6 14 107 - -
Mibi13g0959 725 Pfam Ubiquitin family 24 94 IPR000626 GO:0005515
Mibi13g0959 725 MobiDBLite consensus disorder prediction 674 725 - -
Mibi13g0959 725 SMART ubq_7 22 93 IPR000626 GO:0005515
Mibi13g0959 725 MobiDBLite consensus disorder prediction 178 221 - -
Mibi13g0959 725 CDD Ubl_ubiquitin_like 24 91 - -
Mibi13g0959 725 MobiDBLite consensus disorder prediction 629 643 - -
Mibi13g0959 725 MobiDBLite consensus disorder prediction 164 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0959 Mibi-ChrMibi13 12266846 12273979 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0959 22 93 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 36.111 2.80e-08 51.2