Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0906 ATGCATTGTGTGTTCCCTCGAGGGTTTGTGCGTTCTGTGTTGCGTCGAGTGTCTCTTGCCTTTTTTATTTTGAAGGTGAAACGTGAAATCAATGATTTTGAAGGTGAAACCAATGTGGCAGATGATAACACATCTAACGTGGCAAAAAATCCAATGTGGCTGACTTTCAGAAATAAACTTAGTCACCTCATGGAAAGCAAAGGACTGGCACTGAAGCCACAGCCCAAAAAGAATATGTGGAAGCCTGAGGAAGACTTGGTTCTGAAAACATACATTGAAGCTCACGGTGAAGGAAACTGGGAAGCAGTTTCCAAAAATTCAGGTCTAAATAGAGGAGGTAAGAGTTGCAGGCTAAGATGGAAGAACTATTTGAGACCTGACATTAAACGAGGAGGAATGTCTGAAGAAGAAGAAGACCTCATCATTAGACTCCATAAGCTTCTGGGCAACAGATGGTCGCTGATAGCTGGAAGAATTCCTGGAAGAACCGATAACGAAGTGAAGAATTACTGGAATACACATTTGAACAAGAGAAGCCCTGGAGGCAAAAGGAAATCCATCGATTCAAACAACGATGAGCAAGAAACCAACAAGAAATCACGAATCAGCAACTCCGACTTTCCGATTTCAACAAGCATAGCAGAGACAGGGTTATTAAATGAGAAAATCAACATCACAAACTCTTGGATCGACGAAACGGAGAAGTTCCAGTGTGACCTAGATTTTCCGATTCAGGCATTTGATTTCGACGATGAGGCTCTCATGAGGAATTTGAATTCCTTTGCGCTGTTTGAAACTGAAGCTTTAGATTATGGATGGTCGGAGTCCAATTTGTACGAGCAATGCTTCATGCCATAG 858 0.4207 MHCVFPRGFVRSVLRRVSLAFFILKVKREINDFEGETNVADDNTSNVAKNPMWLTFRNKLSHLMESKGLALKPQPKKNMWKPEEDLVLKTYIEAHGEGNWEAVSKNSGLNRGGKSCRLRWKNYLRPDIKRGGMSEEEEDLIIRLHKLLGNRWSLIAGRIPGRTDNEVKNYWNTHLNKRSPGGKRKSIDSNNDEQETNKKSRISNSDFPISTSIAETGLLNEKINITNSWIDETEKFQCDLDFPIQAFDFDDEALMRNLNSFALFETEALDYGWSESNLYEQCFMP 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0906 285 FunFam Transcription factor TT2 133 203 - -
Mibi13g0906 285 Gene3D - 133 205 - -
Mibi13g0906 285 ProSiteProfiles Myb-like domain profile. 125 175 IPR001005 -
Mibi13g0906 285 Gene3D - 77 129 - -
Mibi13g0906 285 MobiDBLite consensus disorder prediction 181 200 - -
Mibi13g0906 285 Pfam Myb-like DNA-binding domain 130 175 IPR001005 -
Mibi13g0906 285 Pfam Myb-like DNA-binding domain 77 124 IPR001005 -
Mibi13g0906 285 ProSiteProfiles Myb-like domain profile. 72 124 IPR001005 -
Mibi13g0906 285 MobiDBLite consensus disorder prediction 173 205 - -
Mibi13g0906 285 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 74 210 - -
Mibi13g0906 285 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 125 179 IPR017930 -
Mibi13g0906 285 CDD SANT 133 175 IPR001005 -
Mibi13g0906 285 SUPERFAMILY Homeodomain-like 76 171 IPR009057 -
Mibi13g0906 285 CDD SANT 80 124 IPR001005 -
Mibi13g0906 285 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 124 IPR017930 -
Mibi13g0906 285 FunFam MYB-related transcription factor 76 129 - -
Mibi13g0906 285 SMART sant 76 126 IPR001005 -
Mibi13g0906 285 SMART sant 129 177 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0906 Mibi-ChrMibi13 11562329 11567041 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0906 64 264 MYB Transcription Factor Family AT5G52600 48.077 1.13e-60 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi13g0906 Myb_DNA-binding 3.4e-12 CL0123